FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639438_at:

>probe:Drosophila_2:1639438_at:497:31; Interrogation_Position=4546; Antisense; ATAAAACTGATTCCCGAACTGCACA
>probe:Drosophila_2:1639438_at:323:479; Interrogation_Position=4574; Antisense; GTTTGGCCTTATGGGCACCATGTAT
>probe:Drosophila_2:1639438_at:715:525; Interrogation_Position=4586; Antisense; GGGCACCATGTATTTTTGGCTAAAT
>probe:Drosophila_2:1639438_at:5:3; Interrogation_Position=4611; Antisense; ATTGTTTCGTTTAACACTTCTTCTG
>probe:Drosophila_2:1639438_at:519:149; Interrogation_Position=4626; Antisense; ACTTCTTCTGTTTGACTTTCTGTCG
>probe:Drosophila_2:1639438_at:440:501; Interrogation_Position=4647; Antisense; GTCGCAATGATATGGAGCCTGCCAA
>probe:Drosophila_2:1639438_at:541:315; Interrogation_Position=4663; Antisense; GCCTGCCAACGTCCGGAGAAATCAA
>probe:Drosophila_2:1639438_at:23:107; Interrogation_Position=4679; Antisense; AGAAATCAAATCACCAGCTCGCTTT
>probe:Drosophila_2:1639438_at:219:637; Interrogation_Position=4703; Antisense; TCGAGTGGCGTCTTATTTTTGTACA
>probe:Drosophila_2:1639438_at:625:567; Interrogation_Position=4773; Antisense; GGCACTGTACCCAAACGCATAGAGA
>probe:Drosophila_2:1639438_at:187:139; Interrogation_Position=4822; Antisense; ACGATACGATGTACATTGTCCAGGA
>probe:Drosophila_2:1639438_at:383:713; Interrogation_Position=4873; Antisense; TTCGTTCAACACCATTTTACACCAT
>probe:Drosophila_2:1639438_at:453:653; Interrogation_Position=4961; Antisense; TAATTGCCACCATTGTAGAGCCCTA
>probe:Drosophila_2:1639438_at:710:675; Interrogation_Position=4976; Antisense; TAGAGCCCTAAACAAACTCACCTAC

Paste this into a BLAST search page for me
ATAAAACTGATTCCCGAACTGCACAGTTTGGCCTTATGGGCACCATGTATGGGCACCATGTATTTTTGGCTAAATATTGTTTCGTTTAACACTTCTTCTGACTTCTTCTGTTTGACTTTCTGTCGGTCGCAATGATATGGAGCCTGCCAAGCCTGCCAACGTCCGGAGAAATCAAAGAAATCAAATCACCAGCTCGCTTTTCGAGTGGCGTCTTATTTTTGTACAGGCACTGTACCCAAACGCATAGAGAACGATACGATGTACATTGTCCAGGATTCGTTCAACACCATTTTACACCATTAATTGCCACCATTGTAGAGCCCTATAGAGCCCTAAACAAACTCACCTAC

Full Affymetrix probeset data:

Annotations for 1639438_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720