FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639442_a_at:

>probe:Drosophila_2:1639442_a_at:422:45; Interrogation_Position=215; Antisense; ATCGCCTGTGTGTGCCGCAAATCTA
>probe:Drosophila_2:1639442_a_at:82:507; Interrogation_Position=226; Antisense; GTGCCGCAAATCTATTTGGCCGAGT
>probe:Drosophila_2:1639442_a_at:97:39; Interrogation_Position=235; Antisense; ATCTATTTGGCCGAGTGCCAGCAGC
>probe:Drosophila_2:1639442_a_at:360:119; Interrogation_Position=257; Antisense; AGCTGCTGGCCGATCCCTCGGAGGC
>probe:Drosophila_2:1639442_a_at:577:407; Interrogation_Position=308; Antisense; GACGGGATCGAGTGGACTGCCTGGA
>probe:Drosophila_2:1639442_a_at:486:43; Interrogation_Position=337; Antisense; ATCGAGCAGCGCAAGGCCGATGTGC
>probe:Drosophila_2:1639442_a_at:440:261; Interrogation_Position=366; Antisense; CACCGAGCCGGAGGACATGTACATC
>probe:Drosophila_2:1639442_a_at:715:437; Interrogation_Position=376; Antisense; GAGGACATGTACATCGCCTATCATC
>probe:Drosophila_2:1639442_a_at:675:665; Interrogation_Position=385; Antisense; TACATCGCCTATCATCGCAAGAACG
>probe:Drosophila_2:1639442_a_at:217:383; Interrogation_Position=405; Antisense; GAACGAGGACTATCGCGTGATCTCT
>probe:Drosophila_2:1639442_a_at:580:557; Interrogation_Position=411; Antisense; GGACTATCGCGTGATCTCTGAGATC
>probe:Drosophila_2:1639442_a_at:314:451; Interrogation_Position=423; Antisense; GATCTCTGAGATCCGAACGCAGCAG
>probe:Drosophila_2:1639442_a_at:230:97; Interrogation_Position=431; Antisense; AGATCCGAACGCAGCAGGACAAGGA
>probe:Drosophila_2:1639442_a_at:88:317; Interrogation_Position=664; Antisense; GCCGCCTTCCGTTACGAGGGCATTA

Paste this into a BLAST search page for me
ATCGCCTGTGTGTGCCGCAAATCTAGTGCCGCAAATCTATTTGGCCGAGTATCTATTTGGCCGAGTGCCAGCAGCAGCTGCTGGCCGATCCCTCGGAGGCGACGGGATCGAGTGGACTGCCTGGAATCGAGCAGCGCAAGGCCGATGTGCCACCGAGCCGGAGGACATGTACATCGAGGACATGTACATCGCCTATCATCTACATCGCCTATCATCGCAAGAACGGAACGAGGACTATCGCGTGATCTCTGGACTATCGCGTGATCTCTGAGATCGATCTCTGAGATCCGAACGCAGCAGAGATCCGAACGCAGCAGGACAAGGAGCCGCCTTCCGTTACGAGGGCATTA

Full Affymetrix probeset data:

Annotations for 1639442_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720