FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639444_a_at:

>probe:Drosophila_2:1639444_a_at:414:559; Interrogation_Position=3352; Antisense; GGAAATGCCATGGTCTCTTTTTACA
>probe:Drosophila_2:1639444_a_at:422:495; Interrogation_Position=3364; Antisense; GTCTCTTTTTACATCACCGAACTTA
>probe:Drosophila_2:1639444_a_at:597:83; Interrogation_Position=3416; Antisense; AGGGCCAGTGCCTGATTAGCATCGG
>probe:Drosophila_2:1639444_a_at:428:575; Interrogation_Position=3442; Antisense; GGCGATGCTGTCTATGTGAGCTACC
>probe:Drosophila_2:1639444_a_at:228:513; Interrogation_Position=3457; Antisense; GTGAGCTACCATGCCGATGACTGAT
>probe:Drosophila_2:1639444_a_at:372:269; Interrogation_Position=3507; Antisense; CATGTTTTACGCGAATCGTCCCAAA
>probe:Drosophila_2:1639444_a_at:693:41; Interrogation_Position=3521; Antisense; ATCGTCCCAAAAGCGTATACTCTCT
>probe:Drosophila_2:1639444_a_at:436:687; Interrogation_Position=3536; Antisense; TATACTCTCTATTTTCTTCCGCTTA
>probe:Drosophila_2:1639444_a_at:598:675; Interrogation_Position=3563; Antisense; TAGAACTATCAGCTCTGCCCAGCAA
>probe:Drosophila_2:1639444_a_at:247:561; Interrogation_Position=3680; Antisense; GGAATCGTTCTAATCCTAACTTAGT
>probe:Drosophila_2:1639444_a_at:389:679; Interrogation_Position=3704; Antisense; TAGTGCTAATTTTTTCGGTCTTGTT
>probe:Drosophila_2:1639444_a_at:569:289; Interrogation_Position=3719; Antisense; CGGTCTTGTTACTTGTTTGCTGGAT
>probe:Drosophila_2:1639444_a_at:153:669; Interrogation_Position=3875; Antisense; TACTCGTACCACTAGATATCCAATT
>probe:Drosophila_2:1639444_a_at:489:457; Interrogation_Position=3889; Antisense; GATATCCAATTTTGGCGCGTAAAAT

Paste this into a BLAST search page for me
GGAAATGCCATGGTCTCTTTTTACAGTCTCTTTTTACATCACCGAACTTAAGGGCCAGTGCCTGATTAGCATCGGGGCGATGCTGTCTATGTGAGCTACCGTGAGCTACCATGCCGATGACTGATCATGTTTTACGCGAATCGTCCCAAAATCGTCCCAAAAGCGTATACTCTCTTATACTCTCTATTTTCTTCCGCTTATAGAACTATCAGCTCTGCCCAGCAAGGAATCGTTCTAATCCTAACTTAGTTAGTGCTAATTTTTTCGGTCTTGTTCGGTCTTGTTACTTGTTTGCTGGATTACTCGTACCACTAGATATCCAATTGATATCCAATTTTGGCGCGTAAAAT

Full Affymetrix probeset data:

Annotations for 1639444_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720