FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639450_s_at:

>probe:Drosophila_2:1639450_s_at:147:233; Interrogation_Position=3010; Antisense; AATGCACCGTCAATCAAATCCACAA
>probe:Drosophila_2:1639450_s_at:57:257; Interrogation_Position=3024; Antisense; CAAATCCACAAATGTCTCCGCCAGT
>probe:Drosophila_2:1639450_s_at:309:267; Interrogation_Position=3045; Antisense; CAGTCCCAGGTTTTTCTGACAGCTC
>probe:Drosophila_2:1639450_s_at:222:399; Interrogation_Position=3062; Antisense; GACAGCTCCGATTCCGGTAATGTGA
>probe:Drosophila_2:1639450_s_at:504:453; Interrogation_Position=3085; Antisense; GATCAAAGCAAACAGCCTCACATCT
>probe:Drosophila_2:1639450_s_at:309:651; Interrogation_Position=3102; Antisense; TCACATCTCCTAGCTACCAGAGAGA
>probe:Drosophila_2:1639450_s_at:648:605; Interrogation_Position=3127; Antisense; TGAGAGGATTTCATCACCAACCAAT
>probe:Drosophila_2:1639450_s_at:299:247; Interrogation_Position=3153; Antisense; AATTGGCGCAATGGTTTTCCCCTGA
>probe:Drosophila_2:1639450_s_at:712:701; Interrogation_Position=3167; Antisense; TTTTCCCCTGAGCTTCTTGCAAAAG
>probe:Drosophila_2:1639450_s_at:140:175; Interrogation_Position=3188; Antisense; AAAGCCTCTGCTGGAAAACTGCCAC
>probe:Drosophila_2:1639450_s_at:97:169; Interrogation_Position=3217; Antisense; AAATGTGAACCAAGCACTCAGTTTG
>probe:Drosophila_2:1639450_s_at:532:375; Interrogation_Position=3255; Antisense; GAAGCATTCAACATTCCTCAGGCGT
>probe:Drosophila_2:1639450_s_at:355:575; Interrogation_Position=3275; Antisense; GGCGTCGTGCATAACTAACTCTTGA
>probe:Drosophila_2:1639450_s_at:194:431; Interrogation_Position=3390; Antisense; GAGTATGTCTGTATGGGCACAAATC

Paste this into a BLAST search page for me
AATGCACCGTCAATCAAATCCACAACAAATCCACAAATGTCTCCGCCAGTCAGTCCCAGGTTTTTCTGACAGCTCGACAGCTCCGATTCCGGTAATGTGAGATCAAAGCAAACAGCCTCACATCTTCACATCTCCTAGCTACCAGAGAGATGAGAGGATTTCATCACCAACCAATAATTGGCGCAATGGTTTTCCCCTGATTTTCCCCTGAGCTTCTTGCAAAAGAAAGCCTCTGCTGGAAAACTGCCACAAATGTGAACCAAGCACTCAGTTTGGAAGCATTCAACATTCCTCAGGCGTGGCGTCGTGCATAACTAACTCTTGAGAGTATGTCTGTATGGGCACAAATC

Full Affymetrix probeset data:

Annotations for 1639450_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720