FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639459_a_at:

>probe:Drosophila_2:1639459_a_at:116:55; Interrogation_Position=4315; Antisense; ATGCACTGCCAATTGTTTTGCGCAA
>probe:Drosophila_2:1639459_a_at:126:249; Interrogation_Position=4363; Antisense; AATTGGTTGGCTACATTTTGCACTT
>probe:Drosophila_2:1639459_a_at:331:677; Interrogation_Position=4401; Antisense; TAGTCTTTGGTTCTGTCTGACGGCA
>probe:Drosophila_2:1639459_a_at:703:499; Interrogation_Position=4415; Antisense; GTCTGACGGCATTATTGAAATTTCT
>probe:Drosophila_2:1639459_a_at:65:715; Interrogation_Position=4439; Antisense; TTCTATCACAGAATACCGTCCATTT
>probe:Drosophila_2:1639459_a_at:621:1; Interrogation_Position=4512; Antisense; ATTTAAGGGAGCTGCCCGAGTAGCT
>probe:Drosophila_2:1639459_a_at:654:429; Interrogation_Position=4529; Antisense; GAGTAGCTCAACAAAAGCCACCTAT
>probe:Drosophila_2:1639459_a_at:381:127; Interrogation_Position=4544; Antisense; AGCCACCTATTTTATGTATTTCTAT
>probe:Drosophila_2:1639459_a_at:238:61; Interrogation_Position=4557; Antisense; ATGTATTTCTATTGCGCGAGTATGT
>probe:Drosophila_2:1639459_a_at:700:379; Interrogation_Position=4584; Antisense; GAACGAACATTCCATTATTTTTAAT
>probe:Drosophila_2:1639459_a_at:601:651; Interrogation_Position=4605; Antisense; TAATATGTTTTCTCGCTTTACGTTT
>probe:Drosophila_2:1639459_a_at:592:167; Interrogation_Position=4637; Antisense; AAATGTCTTCTACTTTACACACAAA
>probe:Drosophila_2:1639459_a_at:78:595; Interrogation_Position=4680; Antisense; TGTGGCTAAACAAAATCGGCTACTT
>probe:Drosophila_2:1639459_a_at:107:51; Interrogation_Position=4746; Antisense; ATGCATTTTGAACGTCTTGACTTGA

Paste this into a BLAST search page for me
ATGCACTGCCAATTGTTTTGCGCAAAATTGGTTGGCTACATTTTGCACTTTAGTCTTTGGTTCTGTCTGACGGCAGTCTGACGGCATTATTGAAATTTCTTTCTATCACAGAATACCGTCCATTTATTTAAGGGAGCTGCCCGAGTAGCTGAGTAGCTCAACAAAAGCCACCTATAGCCACCTATTTTATGTATTTCTATATGTATTTCTATTGCGCGAGTATGTGAACGAACATTCCATTATTTTTAATTAATATGTTTTCTCGCTTTACGTTTAAATGTCTTCTACTTTACACACAAATGTGGCTAAACAAAATCGGCTACTTATGCATTTTGAACGTCTTGACTTGA

Full Affymetrix probeset data:

Annotations for 1639459_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720