FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639461_a_at:

>probe:Drosophila_2:1639461_a_at:657:555; Interrogation_Position=9101; Antisense; GGCCTTCGACAACAAGACCGTGAGC
>probe:Drosophila_2:1639461_a_at:247:413; Interrogation_Position=9116; Antisense; GACCGTGAGCTTCGAGGAGCACATC
>probe:Drosophila_2:1639461_a_at:561:189; Interrogation_Position=9153; Antisense; AACATGTGGCACTATCTGTACTTCA
>probe:Drosophila_2:1639461_a_at:642:39; Interrogation_Position=9166; Antisense; ATCTGTACTTCATCGTCCTTGTAAA
>probe:Drosophila_2:1639461_a_at:35:391; Interrogation_Position=9194; Antisense; GAAAGACCCCACTGAATTCACTGGC
>probe:Drosophila_2:1639461_a_at:86:651; Interrogation_Position=9211; Antisense; TCACTGGCCCCGAAAGCTATGTATA
>probe:Drosophila_2:1639461_a_at:388:583; Interrogation_Position=9251; Antisense; TGGAATCCTGGAGTGGTTCCCGCGC
>probe:Drosophila_2:1639461_a_at:273:529; Interrogation_Position=9313; Antisense; GGGAGCAAATCGAGCTGCGCAGCAT
>probe:Drosophila_2:1639461_a_at:84:349; Interrogation_Position=9334; Antisense; GCATGCAGGCACAGCTTTTGGACAC
>probe:Drosophila_2:1639461_a_at:67:621; Interrogation_Position=9364; Antisense; TGCTCATTAAGAACCTGTCCACCCA
>probe:Drosophila_2:1639461_a_at:254:593; Interrogation_Position=9442; Antisense; TGGGATTGCTCAACACAACGGCCAA
>probe:Drosophila_2:1639461_a_at:303:631; Interrogation_Position=9472; Antisense; TCCTGCCGTTTCAGTGAGTCTGTAA
>probe:Drosophila_2:1639461_a_at:533:385; Interrogation_Position=9537; Antisense; GAACATTCCATGTGAACCCAAAGGT
>probe:Drosophila_2:1639461_a_at:375:211; Interrogation_Position=9640; Antisense; CAAGAATCGTTCAATACCCCTAGTA

Paste this into a BLAST search page for me
GGCCTTCGACAACAAGACCGTGAGCGACCGTGAGCTTCGAGGAGCACATCAACATGTGGCACTATCTGTACTTCAATCTGTACTTCATCGTCCTTGTAAAGAAAGACCCCACTGAATTCACTGGCTCACTGGCCCCGAAAGCTATGTATATGGAATCCTGGAGTGGTTCCCGCGCGGGAGCAAATCGAGCTGCGCAGCATGCATGCAGGCACAGCTTTTGGACACTGCTCATTAAGAACCTGTCCACCCATGGGATTGCTCAACACAACGGCCAATCCTGCCGTTTCAGTGAGTCTGTAAGAACATTCCATGTGAACCCAAAGGTCAAGAATCGTTCAATACCCCTAGTA

Full Affymetrix probeset data:

Annotations for 1639461_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720