FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639479_a_at:

>probe:Drosophila_2:1639479_a_at:75:695; Interrogation_Position=3340; Antisense; TTTGCAGCATATCTACGCGTAATAT
>probe:Drosophila_2:1639479_a_at:353:179; Interrogation_Position=3393; Antisense; AAACATATCGTGCACTTAGTCCTAA
>probe:Drosophila_2:1639479_a_at:352:679; Interrogation_Position=3409; Antisense; TAGTCCTAATATCCACCCTAAGCGA
>probe:Drosophila_2:1639479_a_at:215:51; Interrogation_Position=3447; Antisense; ATGCCCATCATATCCACAATTCAAA
>probe:Drosophila_2:1639479_a_at:127:645; Interrogation_Position=3474; Antisense; TCATTTTGAGCGAACCACTTACCTA
>probe:Drosophila_2:1639479_a_at:39:1; Interrogation_Position=3487; Antisense; ACCACTTACCTATATCAACAACCAA
>probe:Drosophila_2:1639479_a_at:38:31; Interrogation_Position=3531; Antisense; ATACATTTCGCTATTCAAGTCAGTG
>probe:Drosophila_2:1639479_a_at:377:453; Interrogation_Position=3559; Antisense; GATAAACTACCGATTTGTTGACTAG
>probe:Drosophila_2:1639479_a_at:498:455; Interrogation_Position=3686; Antisense; GATAATGTACGCTTGCACTCCTAGA
>probe:Drosophila_2:1639479_a_at:8:345; Interrogation_Position=3696; Antisense; GCTTGCACTCCTAGATCTACAAAAT
>probe:Drosophila_2:1639479_a_at:321:175; Interrogation_Position=3732; Antisense; AAACGAAATGGCTGGCTACGCAATT
>probe:Drosophila_2:1639479_a_at:157:529; Interrogation_Position=3758; Antisense; GGGAGCGGCCAATACAAGCATATCT
>probe:Drosophila_2:1639479_a_at:628:661; Interrogation_Position=3797; Antisense; TAAACAGCAGAACTTAGCCGCAAAA
>probe:Drosophila_2:1639479_a_at:199:39; Interrogation_Position=3860; Antisense; ATCTAGCAACGCTCTCTGTTTTGTA

Paste this into a BLAST search page for me
TTTGCAGCATATCTACGCGTAATATAAACATATCGTGCACTTAGTCCTAATAGTCCTAATATCCACCCTAAGCGAATGCCCATCATATCCACAATTCAAATCATTTTGAGCGAACCACTTACCTAACCACTTACCTATATCAACAACCAAATACATTTCGCTATTCAAGTCAGTGGATAAACTACCGATTTGTTGACTAGGATAATGTACGCTTGCACTCCTAGAGCTTGCACTCCTAGATCTACAAAATAAACGAAATGGCTGGCTACGCAATTGGGAGCGGCCAATACAAGCATATCTTAAACAGCAGAACTTAGCCGCAAAAATCTAGCAACGCTCTCTGTTTTGTA

Full Affymetrix probeset data:

Annotations for 1639479_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720