FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639528_at:

>probe:Drosophila_2:1639528_at:518:591; Interrogation_Position=1633; Antisense; TGCGGTTTCCTTATGGGTTTGGTCT
>probe:Drosophila_2:1639528_at:275:537; Interrogation_Position=1652; Antisense; TGGTCTACGTTACACCGGGCGGACA
>probe:Drosophila_2:1639528_at:542:545; Interrogation_Position=1679; Antisense; GGATCCTCACTTTGGTGGACTTCTA
>probe:Drosophila_2:1639528_at:403:519; Interrogation_Position=1693; Antisense; GTGGACTTCTATGGCGGAACCTATG
>probe:Drosophila_2:1639528_at:682:681; Interrogation_Position=1714; Antisense; TATGTGGTCTTCATCTTGGCCATTT
>probe:Drosophila_2:1639528_at:201:273; Interrogation_Position=1734; Antisense; CATTTTCGAACTGGCTGGCATCGTG
>probe:Drosophila_2:1639528_at:473:271; Interrogation_Position=1752; Antisense; CATCGTGTGGGTTTATGGTCTGCAA
>probe:Drosophila_2:1639528_at:716:429; Interrogation_Position=1795; Antisense; GAGTTTATGTGCAATCGCCGAGTTT
>probe:Drosophila_2:1639528_at:440:315; Interrogation_Position=1811; Antisense; GCCGAGTTTCACTGTACTGGCGAGT
>probe:Drosophila_2:1639528_at:560:141; Interrogation_Position=1826; Antisense; ACTGGCGAGTATGCTGGTCCTTCTT
>probe:Drosophila_2:1639528_at:559:241; Interrogation_Position=1910; Antisense; AATATAGCGAACTGTACTTCCCCGA
>probe:Drosophila_2:1639528_at:437:563; Interrogation_Position=2036; Antisense; GGAAGTCTCTGAAGGCCTCGCTGAA
>probe:Drosophila_2:1639528_at:176:531; Interrogation_Position=2076; Antisense; GGGTCCTGCCAATCCGGAAATTCGG
>probe:Drosophila_2:1639528_at:601:389; Interrogation_Position=2163; Antisense; GAAACTTGGTTTCTTCTGGCGCAAA

Paste this into a BLAST search page for me
TGCGGTTTCCTTATGGGTTTGGTCTTGGTCTACGTTACACCGGGCGGACAGGATCCTCACTTTGGTGGACTTCTAGTGGACTTCTATGGCGGAACCTATGTATGTGGTCTTCATCTTGGCCATTTCATTTTCGAACTGGCTGGCATCGTGCATCGTGTGGGTTTATGGTCTGCAAGAGTTTATGTGCAATCGCCGAGTTTGCCGAGTTTCACTGTACTGGCGAGTACTGGCGAGTATGCTGGTCCTTCTTAATATAGCGAACTGTACTTCCCCGAGGAAGTCTCTGAAGGCCTCGCTGAAGGGTCCTGCCAATCCGGAAATTCGGGAAACTTGGTTTCTTCTGGCGCAAA

Full Affymetrix probeset data:

Annotations for 1639528_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720