FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639529_at:

>probe:Drosophila_2:1639529_at:201:203; Interrogation_Position=2287; Antisense; TAAAGGGCGCTATAACCGAGTTTGG
>probe:Drosophila_2:1639529_at:4:481; Interrogation_Position=2306; Antisense; GTTTGGGACCAATTCTTTGCGACAA
>probe:Drosophila_2:1639529_at:249:557; Interrogation_Position=2366; Antisense; GGACTCACAATATCTACCAGCTAGA
>probe:Drosophila_2:1639529_at:650:707; Interrogation_Position=2431; Antisense; TTACTTTTACTGTTTGCACCTCCCG
>probe:Drosophila_2:1639529_at:638:143; Interrogation_Position=2509; Antisense; ACTGCGAATCTACAGCATTGGGATC
>probe:Drosophila_2:1639529_at:715:705; Interrogation_Position=2536; Antisense; TTAGCTTTGATCTTACTGATGCGTG
>probe:Drosophila_2:1639529_at:282:283; Interrogation_Position=2551; Antisense; CTGATGCGTGTGTTGGTTATTCTTT
>probe:Drosophila_2:1639529_at:372:703; Interrogation_Position=2567; Antisense; TTATTCTTTTGTGGCTTGTCCTTCT
>probe:Drosophila_2:1639529_at:68:599; Interrogation_Position=2583; Antisense; TGTCCTTCTCTATTTTTCTCAGTGC
>probe:Drosophila_2:1639529_at:3:279; Interrogation_Position=2618; Antisense; CTTTGGCGAGGTTTCATGTGTAGTT
>probe:Drosophila_2:1639529_at:630:471; Interrogation_Position=2707; Antisense; GTTCTACAGCCGCAACCATTAATGT
>probe:Drosophila_2:1639529_at:680:273; Interrogation_Position=2723; Antisense; CATTAATGTGGCCTTAGCTTCTGTG
>probe:Drosophila_2:1639529_at:469:115; Interrogation_Position=2738; Antisense; AGCTTCTGTGGTTTGCCTACTTTCA
>probe:Drosophila_2:1639529_at:340:315; Interrogation_Position=2752; Antisense; GCCTACTTTCATTTTTTCGCATTGT

Paste this into a BLAST search page for me
TAAAGGGCGCTATAACCGAGTTTGGGTTTGGGACCAATTCTTTGCGACAAGGACTCACAATATCTACCAGCTAGATTACTTTTACTGTTTGCACCTCCCGACTGCGAATCTACAGCATTGGGATCTTAGCTTTGATCTTACTGATGCGTGCTGATGCGTGTGTTGGTTATTCTTTTTATTCTTTTGTGGCTTGTCCTTCTTGTCCTTCTCTATTTTTCTCAGTGCCTTTGGCGAGGTTTCATGTGTAGTTGTTCTACAGCCGCAACCATTAATGTCATTAATGTGGCCTTAGCTTCTGTGAGCTTCTGTGGTTTGCCTACTTTCAGCCTACTTTCATTTTTTCGCATTGT

Full Affymetrix probeset data:

Annotations for 1639529_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720