FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639548_s_at:

>probe:Drosophila_2:1639548_s_at:421:239; Interrogation_Position=7253; Antisense; AATCAATATGGCCACGCTCTTAGCT
>probe:Drosophila_2:1639548_s_at:251:343; Interrogation_Position=7275; Antisense; GCTTAGCTCGATTCCAATATTGTCC
>probe:Drosophila_2:1639548_s_at:413:569; Interrogation_Position=7303; Antisense; TGGTCTAAGAGGCTCTTCCGTACAC
>probe:Drosophila_2:1639548_s_at:62:157; Interrogation_Position=7324; Antisense; ACACCCGCTGTGTTAAGATCATTAG
>probe:Drosophila_2:1639548_s_at:562:711; Interrogation_Position=7359; Antisense; TTCACCTATGAAACAGCCAGAGTCT
>probe:Drosophila_2:1639548_s_at:448:525; Interrogation_Position=7397; Antisense; GGGCACTTCCCATTTAAGTCAGACT
>probe:Drosophila_2:1639548_s_at:604:231; Interrogation_Position=7437; Antisense; AATGCAGTTCGACAGCGGTTGTAAT
>probe:Drosophila_2:1639548_s_at:436:93; Interrogation_Position=7497; Antisense; AGTTCATCGGTTGGGCATTGACTTC
>probe:Drosophila_2:1639548_s_at:240:265; Interrogation_Position=7550; Antisense; CAGAGAAAGCCCTAGCCCGGTATAA
>probe:Drosophila_2:1639548_s_at:649:537; Interrogation_Position=7568; Antisense; GGTATAAAAAACCTCAGCCCACTAT
>probe:Drosophila_2:1639548_s_at:19:99; Interrogation_Position=7653; Antisense; AGAGAGGTCCTGCACAAAATCCGGG
>probe:Drosophila_2:1639548_s_at:180:369; Interrogation_Position=7685; Antisense; GAATCCACCATATGTAGTGCACCGT
>probe:Drosophila_2:1639548_s_at:187:717; Interrogation_Position=7709; Antisense; TTGCCCGGTGGTAAATTCTAATTCT
>probe:Drosophila_2:1639548_s_at:661:225; Interrogation_Position=7744; Antisense; AAGGACACTAATACGCCGACGCAAA

Paste this into a BLAST search page for me
AATCAATATGGCCACGCTCTTAGCTGCTTAGCTCGATTCCAATATTGTCCTGGTCTAAGAGGCTCTTCCGTACACACACCCGCTGTGTTAAGATCATTAGTTCACCTATGAAACAGCCAGAGTCTGGGCACTTCCCATTTAAGTCAGACTAATGCAGTTCGACAGCGGTTGTAATAGTTCATCGGTTGGGCATTGACTTCCAGAGAAAGCCCTAGCCCGGTATAAGGTATAAAAAACCTCAGCCCACTATAGAGAGGTCCTGCACAAAATCCGGGGAATCCACCATATGTAGTGCACCGTTTGCCCGGTGGTAAATTCTAATTCTAAGGACACTAATACGCCGACGCAAA

Full Affymetrix probeset data:

Annotations for 1639548_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720