FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639550_a_at:

>probe:Drosophila_2:1639550_a_at:517:329; Interrogation_Position=2491; Antisense; GCGTGAGCGGCGACAATGACTCGAA
>probe:Drosophila_2:1639550_a_at:539:575; Interrogation_Position=2499; Antisense; GGCGACAATGACTCGAATGCCTCCT
>probe:Drosophila_2:1639550_a_at:671:503; Interrogation_Position=2538; Antisense; GTCCATCCCATATCGCTTAAGGAGG
>probe:Drosophila_2:1639550_a_at:154:341; Interrogation_Position=2552; Antisense; GCTTAAGGAGGAGGCATGACTTTTC
>probe:Drosophila_2:1639550_a_at:71:53; Interrogation_Position=2567; Antisense; ATGACTTTTCAGTGGTTTTCCCGTG
>probe:Drosophila_2:1639550_a_at:51:113; Interrogation_Position=2650; Antisense; AGCAACAGACCAGTCGCAGTCGCAT
>probe:Drosophila_2:1639550_a_at:6:35; Interrogation_Position=2673; Antisense; ATCATGTCGCGCATCTTCTAAAGGT
>probe:Drosophila_2:1639550_a_at:331:503; Interrogation_Position=2678; Antisense; GTCGCGCATCTTCTAAAGGTGTTAA
>probe:Drosophila_2:1639550_a_at:648:261; Interrogation_Position=2772; Antisense; CAGCTCCTTCCAGGCGACGAAAAAA
>probe:Drosophila_2:1639550_a_at:534:137; Interrogation_Position=2799; Antisense; ACGACCAGAGGCATTTAATACCAAA
>probe:Drosophila_2:1639550_a_at:293:241; Interrogation_Position=2815; Antisense; AATACCAAAGCAATAACCGTTATGT
>probe:Drosophila_2:1639550_a_at:712:705; Interrogation_Position=2978; Antisense; TTAGTGAGTACTTGTGTGGACACAC
>probe:Drosophila_2:1639550_a_at:721:517; Interrogation_Position=2991; Antisense; GTGTGGACACACATTTTCCAGTGTA
>probe:Drosophila_2:1639550_a_at:684:717; Interrogation_Position=3006; Antisense; TTCCAGTGTATTTTCTAGGACTAAG

Paste this into a BLAST search page for me
GCGTGAGCGGCGACAATGACTCGAAGGCGACAATGACTCGAATGCCTCCTGTCCATCCCATATCGCTTAAGGAGGGCTTAAGGAGGAGGCATGACTTTTCATGACTTTTCAGTGGTTTTCCCGTGAGCAACAGACCAGTCGCAGTCGCATATCATGTCGCGCATCTTCTAAAGGTGTCGCGCATCTTCTAAAGGTGTTAACAGCTCCTTCCAGGCGACGAAAAAAACGACCAGAGGCATTTAATACCAAAAATACCAAAGCAATAACCGTTATGTTTAGTGAGTACTTGTGTGGACACACGTGTGGACACACATTTTCCAGTGTATTCCAGTGTATTTTCTAGGACTAAG

Full Affymetrix probeset data:

Annotations for 1639550_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720