FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639579_s_at:

>probe:Drosophila_2:1639579_s_at:473:375; Interrogation_Position=1003; Antisense; GAAGAGGCGCGATCATCACAGCTAC
>probe:Drosophila_2:1639579_s_at:75:341; Interrogation_Position=1023; Antisense; GCTACTGGCTAAACTGCTGCATTGG
>probe:Drosophila_2:1639579_s_at:78:517; Interrogation_Position=1063; Antisense; GTGGTACATTGTTGGACTGGCCCTG
>probe:Drosophila_2:1639579_s_at:637:43; Interrogation_Position=1140; Antisense; ATCCGTTTATGGTGGTGCGACCGCT
>probe:Drosophila_2:1639579_s_at:103:729; Interrogation_Position=1164; Antisense; TTGGTTATCCAGTTCTTTTGCCCGA
>probe:Drosophila_2:1639579_s_at:661:625; Interrogation_Position=1182; Antisense; TGCCCGACGACTGCAGTGAGGTGTT
>probe:Drosophila_2:1639579_s_at:48:367; Interrogation_Position=1224; Antisense; GAATCTCCTTTGTGGTGGCTTGCTA
>probe:Drosophila_2:1639579_s_at:193:281; Interrogation_Position=1256; Antisense; CTCATTTCTTCCTACATAGCCTTTA
>probe:Drosophila_2:1639579_s_at:350:29; Interrogation_Position=1280; Antisense; ATACTCGCTAGACAGGCTTACTTGT
>probe:Drosophila_2:1639579_s_at:332:81; Interrogation_Position=1311; Antisense; AGGGATCCACCTTGCACGAATACAA
>probe:Drosophila_2:1639579_s_at:357:141; Interrogation_Position=1377; Antisense; ACTGGCGAGCCATCTTAAAGTGACT
>probe:Drosophila_2:1639579_s_at:581:255; Interrogation_Position=1458; Antisense; CAAATCTTAACGCTGTTCTCGGTAG
>probe:Drosophila_2:1639579_s_at:618:709; Interrogation_Position=1473; Antisense; TTCTCGGTAGTCGTACTTAGTCGTA
>probe:Drosophila_2:1639579_s_at:687:673; Interrogation_Position=1490; Antisense; TAGTCGTACCGCTTTGAAGTCTTTA

Paste this into a BLAST search page for me
GAAGAGGCGCGATCATCACAGCTACGCTACTGGCTAAACTGCTGCATTGGGTGGTACATTGTTGGACTGGCCCTGATCCGTTTATGGTGGTGCGACCGCTTTGGTTATCCAGTTCTTTTGCCCGATGCCCGACGACTGCAGTGAGGTGTTGAATCTCCTTTGTGGTGGCTTGCTACTCATTTCTTCCTACATAGCCTTTAATACTCGCTAGACAGGCTTACTTGTAGGGATCCACCTTGCACGAATACAAACTGGCGAGCCATCTTAAAGTGACTCAAATCTTAACGCTGTTCTCGGTAGTTCTCGGTAGTCGTACTTAGTCGTATAGTCGTACCGCTTTGAAGTCTTTA

Full Affymetrix probeset data:

Annotations for 1639579_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720