FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639585_a_at:

>probe:Drosophila_2:1639585_a_at:20:649; Interrogation_Position=1026; Antisense; TCAGCGATGCCTACTTGAGCGATTT
>probe:Drosophila_2:1639585_a_at:155:39; Interrogation_Position=1109; Antisense; ATCTACGACTGGACAGCCGGCGGTG
>probe:Drosophila_2:1639585_a_at:695:199; Interrogation_Position=1161; Antisense; AACGCATCGACTTCAACCAGTTTGA
>probe:Drosophila_2:1639585_a_at:211:479; Interrogation_Position=1180; Antisense; GTTTGAGGCCGATATTCACAACAAG
>probe:Drosophila_2:1639585_a_at:472:379; Interrogation_Position=1247; Antisense; GAAGCCCGTATCAAGTACTGCCATG
>probe:Drosophila_2:1639585_a_at:151:667; Interrogation_Position=1262; Antisense; TACTGCCATGAGAAGCCCGATCTGA
>probe:Drosophila_2:1639585_a_at:361:245; Interrogation_Position=1289; Antisense; AATTACTTCAATGTGCCGCGTTTCG
>probe:Drosophila_2:1639585_a_at:423:219; Interrogation_Position=1350; Antisense; AAGTCTGGCGTGATGTCTGGTTCAA
>probe:Drosophila_2:1639585_a_at:709:589; Interrogation_Position=1367; Antisense; TGGTTCAATGCTCCCGGCATGAAGT
>probe:Drosophila_2:1639585_a_at:120:55; Interrogation_Position=1385; Antisense; ATGAAGTACCGTCCTGGCTACAATG
>probe:Drosophila_2:1639585_a_at:408:435; Interrogation_Position=1424; Antisense; GAGGGTCTCCTCACCAAGACGAAAA
>probe:Drosophila_2:1639585_a_at:106:25; Interrogation_Position=1448; Antisense; ATAGGCATCAACCAGGGCATCTAGA
>probe:Drosophila_2:1639585_a_at:200:435; Interrogation_Position=1471; Antisense; GAGGGTTTTTGCTATGCTTTCGAGT
>probe:Drosophila_2:1639585_a_at:618:39; Interrogation_Position=954; Antisense; ATCTGCCGGTCGATGCCGTGAAGAA

Paste this into a BLAST search page for me
TCAGCGATGCCTACTTGAGCGATTTATCTACGACTGGACAGCCGGCGGTGAACGCATCGACTTCAACCAGTTTGAGTTTGAGGCCGATATTCACAACAAGGAAGCCCGTATCAAGTACTGCCATGTACTGCCATGAGAAGCCCGATCTGAAATTACTTCAATGTGCCGCGTTTCGAAGTCTGGCGTGATGTCTGGTTCAATGGTTCAATGCTCCCGGCATGAAGTATGAAGTACCGTCCTGGCTACAATGGAGGGTCTCCTCACCAAGACGAAAAATAGGCATCAACCAGGGCATCTAGAGAGGGTTTTTGCTATGCTTTCGAGTATCTGCCGGTCGATGCCGTGAAGAA

Full Affymetrix probeset data:

Annotations for 1639585_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720