FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639602_s_at:

>probe:Drosophila_2:1639602_s_at:279:67; Interrogation_Position=1554; Antisense; ATGGCAAGTCGGCTGTTTCTGTTAC
>probe:Drosophila_2:1639602_s_at:26:693; Interrogation_Position=1569; Antisense; TTTCTGTTACCGGTGGTGTCGACAA
>probe:Drosophila_2:1639602_s_at:160:513; Interrogation_Position=1584; Antisense; GTGTCGACAAACCAAGTAGCTCCTA
>probe:Drosophila_2:1639602_s_at:586:673; Interrogation_Position=1600; Antisense; TAGCTCCTATGCGTCGGCCGTGAAG
>probe:Drosophila_2:1639602_s_at:650:537; Interrogation_Position=1694; Antisense; GGTAAACGAAACTCACTCCTCAAAG
>probe:Drosophila_2:1639602_s_at:641:161; Interrogation_Position=1747; Antisense; ACAATGATGCTTGGCGACTGGCGGC
>probe:Drosophila_2:1639602_s_at:432:179; Interrogation_Position=1788; Antisense; AATAAACGACGGTGGCTCTGTGGCG
>probe:Drosophila_2:1639602_s_at:166:337; Interrogation_Position=1802; Antisense; GCTCTGTGGCGTCAAGCGTATTTAA
>probe:Drosophila_2:1639602_s_at:140:199; Interrogation_Position=1862; Antisense; AACGTTGTCAGCGATGATTCTTCCT
>probe:Drosophila_2:1639602_s_at:95:59; Interrogation_Position=1875; Antisense; ATGATTCTTCCTCGTTTTGTACCAG
>probe:Drosophila_2:1639602_s_at:376:127; Interrogation_Position=1895; Antisense; ACCAGCCAATATTCCTTTGTACGGC
>probe:Drosophila_2:1639602_s_at:312:665; Interrogation_Position=1943; Antisense; TAGTTTTAAGCCTCCGTTCCTGGCG
>probe:Drosophila_2:1639602_s_at:313:395; Interrogation_Position=1983; Antisense; GAAATGCTTTTGTCATACACTCCTA
>probe:Drosophila_2:1639602_s_at:474:407; Interrogation_Position=2032; Antisense; GACGGATTTACAGATTCGCTTTGAT

Paste this into a BLAST search page for me
ATGGCAAGTCGGCTGTTTCTGTTACTTTCTGTTACCGGTGGTGTCGACAAGTGTCGACAAACCAAGTAGCTCCTATAGCTCCTATGCGTCGGCCGTGAAGGGTAAACGAAACTCACTCCTCAAAGACAATGATGCTTGGCGACTGGCGGCAATAAACGACGGTGGCTCTGTGGCGGCTCTGTGGCGTCAAGCGTATTTAAAACGTTGTCAGCGATGATTCTTCCTATGATTCTTCCTCGTTTTGTACCAGACCAGCCAATATTCCTTTGTACGGCTAGTTTTAAGCCTCCGTTCCTGGCGGAAATGCTTTTGTCATACACTCCTAGACGGATTTACAGATTCGCTTTGAT

Full Affymetrix probeset data:

Annotations for 1639602_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720