FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639612_s_at:

>probe:Drosophila_2:1639612_s_at:111:337; Interrogation_Position=1031; Antisense; GCTCCGTGGAGCTTTTATGACCGTA
>probe:Drosophila_2:1639612_s_at:160:611; Interrogation_Position=1048; Antisense; TGACCGTAGGCCAGATTGCGTTCTA
>probe:Drosophila_2:1639612_s_at:713:525; Interrogation_Position=1121; Antisense; GGGCACCTACATCTTAGCATCAATG
>probe:Drosophila_2:1639612_s_at:570:113; Interrogation_Position=1214; Antisense; AGCACCTGGCGAGTATTCTGGATTG
>probe:Drosophila_2:1639612_s_at:167:411; Interrogation_Position=1270; Antisense; GACCTCTGGCTTTCTTCAAGGGATA
>probe:Drosophila_2:1639612_s_at:484:27; Interrogation_Position=1292; Antisense; ATACGTTCCCTCTTTGAGTCGATTA
>probe:Drosophila_2:1639612_s_at:42:433; Interrogation_Position=1307; Antisense; GAGTCGATTATTGCCGCACACGGTA
>probe:Drosophila_2:1639612_s_at:373:139; Interrogation_Position=1326; Antisense; ACGGTATTATTATTCTTGGGCCTCG
>probe:Drosophila_2:1639612_s_at:609:607; Interrogation_Position=1357; Antisense; TGAGGACTCACTTTGGATATCTACC
>probe:Drosophila_2:1639612_s_at:309:595; Interrogation_Position=874; Antisense; TGGGCGCTCCTGCAGATCTGATCAA
>probe:Drosophila_2:1639612_s_at:709:503; Interrogation_Position=900; Antisense; GTCCGCCTGCAGAACGATGTCAAGT
>probe:Drosophila_2:1639612_s_at:702:197; Interrogation_Position=912; Antisense; AACGATGTCAAGTTGCCACCAGAGA
>probe:Drosophila_2:1639612_s_at:632:27; Interrogation_Position=949; Antisense; ATAAGCACGCCATAGACGGACTGGT
>probe:Drosophila_2:1639612_s_at:204:181; Interrogation_Position=999; Antisense; AAAAATCTCTTCAATGGCTCCTCGA

Paste this into a BLAST search page for me
GCTCCGTGGAGCTTTTATGACCGTATGACCGTAGGCCAGATTGCGTTCTAGGGCACCTACATCTTAGCATCAATGAGCACCTGGCGAGTATTCTGGATTGGACCTCTGGCTTTCTTCAAGGGATAATACGTTCCCTCTTTGAGTCGATTAGAGTCGATTATTGCCGCACACGGTAACGGTATTATTATTCTTGGGCCTCGTGAGGACTCACTTTGGATATCTACCTGGGCGCTCCTGCAGATCTGATCAAGTCCGCCTGCAGAACGATGTCAAGTAACGATGTCAAGTTGCCACCAGAGAATAAGCACGCCATAGACGGACTGGTAAAAATCTCTTCAATGGCTCCTCGA

Full Affymetrix probeset data:

Annotations for 1639612_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720