Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639625_at:

>probe:Drosophila_2:1639625_at:403:79; Interrogation_Position=176; Antisense; AGGTCTGGACAGATCTCTTTCTCAA
>probe:Drosophila_2:1639625_at:146:97; Interrogation_Position=186; Antisense; AGATCTCTTTCTCAAATACCTCAGG
>probe:Drosophila_2:1639625_at:504:365; Interrogation_Position=216; Antisense; GAATAGGTTTACTCTCAGCATTGGG
>probe:Drosophila_2:1639625_at:279:333; Interrogation_Position=255; Antisense; GCTGTTCCACAACGAAGCGCTGAAG
>probe:Drosophila_2:1639625_at:697:83; Interrogation_Position=368; Antisense; AGTGGCAGGTGTACTGGTTCACCCT
>probe:Drosophila_2:1639625_at:609:539; Interrogation_Position=383; Antisense; GGTTCACCCTCGAGGAGTACGGCAA
>probe:Drosophila_2:1639625_at:19:73; Interrogation_Position=428; Antisense; AGGAAACGGGCCAGACGAACACCAT
>probe:Drosophila_2:1639625_at:643:385; Interrogation_Position=444; Antisense; GAACACCATCTGCACGCTGTACGAA
>probe:Drosophila_2:1639625_at:650:331; Interrogation_Position=459; Antisense; GCTGTACGAAATAGCCTCCGGCGAG
>probe:Drosophila_2:1639625_at:340:647; Interrogation_Position=492; Antisense; TCACCTGGACTTTTACGGCGTGGAC
>probe:Drosophila_2:1639625_at:271:261; Interrogation_Position=588; Antisense; CAGCCACGGCGTTAAGTTCTTCTAA
>probe:Drosophila_2:1639625_at:724:91; Interrogation_Position=602; Antisense; AGTTCTTCTAAGTGTCCATTCTAAT
>probe:Drosophila_2:1639625_at:138:249; Interrogation_Position=624; Antisense; AATTGTTTACCTTGTCTTGTGGCGC
>probe:Drosophila_2:1639625_at:501:521; Interrogation_Position=642; Antisense; GTGGCGCATCCCGAATTATGTCATA

Paste this into a BLAST search page for me
AGGTCTGGACAGATCTCTTTCTCAAAGATCTCTTTCTCAAATACCTCAGGGAATAGGTTTACTCTCAGCATTGGGGCTGTTCCACAACGAAGCGCTGAAGAGTGGCAGGTGTACTGGTTCACCCTGGTTCACCCTCGAGGAGTACGGCAAAGGAAACGGGCCAGACGAACACCATGAACACCATCTGCACGCTGTACGAAGCTGTACGAAATAGCCTCCGGCGAGTCACCTGGACTTTTACGGCGTGGACCAGCCACGGCGTTAAGTTCTTCTAAAGTTCTTCTAAGTGTCCATTCTAATAATTGTTTACCTTGTCTTGTGGCGCGTGGCGCATCCCGAATTATGTCATA

Full Affymetrix probeset data:

Annotations for 1639625_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime