FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639690_a_at:

>probe:Drosophila_2:1639690_a_at:704:101; Interrogation_Position=5629; Antisense; AGAGCAGTTCTAACAATTAGCGATA
>probe:Drosophila_2:1639690_a_at:150:327; Interrogation_Position=5648; Antisense; GCGATAGGTTTTTGGCTTCATAGAC
>probe:Drosophila_2:1639690_a_at:516:691; Interrogation_Position=5658; Antisense; TTTGGCTTCATAGACAGCGCCTCGG
>probe:Drosophila_2:1639690_a_at:281:315; Interrogation_Position=5676; Antisense; GCCTCGGCGCAAATTTGCGTTGTTT
>probe:Drosophila_2:1639690_a_at:194:113; Interrogation_Position=5712; Antisense; AGCACCAAAAGCTACCAAGATGTTT
>probe:Drosophila_2:1639690_a_at:335:691; Interrogation_Position=5754; Antisense; TATTGCATATAGATCCTTGGTTTTT
>probe:Drosophila_2:1639690_a_at:582:693; Interrogation_Position=5777; Antisense; TTATAGGTTTTGTTTTCGTTGCAAT
>probe:Drosophila_2:1639690_a_at:337:711; Interrogation_Position=5791; Antisense; TTCGTTGCAATTTATAGACCTACCG
>probe:Drosophila_2:1639690_a_at:554:21; Interrogation_Position=5804; Antisense; ATAGACCTACCGATTATTTGTATAA
>probe:Drosophila_2:1639690_a_at:206:191; Interrogation_Position=5835; Antisense; AACCTAAGCTGATACTTAGCCACTA
>probe:Drosophila_2:1639690_a_at:550:159; Interrogation_Position=5879; Antisense; ACAATTACATTTGCCTTGTCAAGCA
>probe:Drosophila_2:1639690_a_at:487:187; Interrogation_Position=5921; Antisense; AACAGCTACTGATTTTCATTTATTG
>probe:Drosophila_2:1639690_a_at:418:137; Interrogation_Position=6111; Antisense; AAATGAAATCACACTTAGCGGAAAC
>probe:Drosophila_2:1639690_a_at:291:275; Interrogation_Position=6124; Antisense; CTTAGCGGAAACACACGGAGCAAAT

Paste this into a BLAST search page for me
AGAGCAGTTCTAACAATTAGCGATAGCGATAGGTTTTTGGCTTCATAGACTTTGGCTTCATAGACAGCGCCTCGGGCCTCGGCGCAAATTTGCGTTGTTTAGCACCAAAAGCTACCAAGATGTTTTATTGCATATAGATCCTTGGTTTTTTTATAGGTTTTGTTTTCGTTGCAATTTCGTTGCAATTTATAGACCTACCGATAGACCTACCGATTATTTGTATAAAACCTAAGCTGATACTTAGCCACTAACAATTACATTTGCCTTGTCAAGCAAACAGCTACTGATTTTCATTTATTGAAATGAAATCACACTTAGCGGAAACCTTAGCGGAAACACACGGAGCAAAT

Full Affymetrix probeset data:

Annotations for 1639690_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720