FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639732_s_at:

>probe:Drosophila_2:1639732_s_at:213:657; Interrogation_Position=3578; Antisense; TAACGGATTGCCACCAAAGCCTGGG
>probe:Drosophila_2:1639732_s_at:417:311; Interrogation_Position=3648; Antisense; GCCAACGGCGGGAAGTATCCCTATC
>probe:Drosophila_2:1639732_s_at:10:191; Interrogation_Position=3709; Antisense; AACATCCTTACATCCTAGAGCGGAG
>probe:Drosophila_2:1639732_s_at:49:77; Interrogation_Position=3732; Antisense; AGGAGCAGCAGCAAGTCACCCACGC
>probe:Drosophila_2:1639732_s_at:37:533; Interrogation_Position=3795; Antisense; GGGTCCGGCAATATCTGGCATCCAC
>probe:Drosophila_2:1639732_s_at:87:585; Interrogation_Position=3810; Antisense; TGGCATCCACTGAGTCGCATCAAGG
>probe:Drosophila_2:1639732_s_at:705:137; Interrogation_Position=3850; Antisense; ACGAGTCCATGGGTGGCTTTAACGA
>probe:Drosophila_2:1639732_s_at:55:455; Interrogation_Position=3882; Antisense; GATCACGCTGAGACGGATGCCACTG
>probe:Drosophila_2:1639732_s_at:135:391; Interrogation_Position=3912; Antisense; GACAACGACGAATCGGAGTCCAGGG
>probe:Drosophila_2:1639732_s_at:210:453; Interrogation_Position=3974; Antisense; GATCTTAGTCTTGGAACACACATGG
>probe:Drosophila_2:1639732_s_at:687:665; Interrogation_Position=4010; Antisense; TACATATCTTGAGCATTACCCTACG
>probe:Drosophila_2:1639732_s_at:331:707; Interrogation_Position=4025; Antisense; TTACCCTACGCTAAGCTTCTACTAG
>probe:Drosophila_2:1639732_s_at:664:273; Interrogation_Position=4040; Antisense; CTTCTACTAGCACTGACACAAACTC
>probe:Drosophila_2:1639732_s_at:14:311; Interrogation_Position=4073; Antisense; CCACCCACACACTTATACGAATATA

Paste this into a BLAST search page for me
TAACGGATTGCCACCAAAGCCTGGGGCCAACGGCGGGAAGTATCCCTATCAACATCCTTACATCCTAGAGCGGAGAGGAGCAGCAGCAAGTCACCCACGCGGGTCCGGCAATATCTGGCATCCACTGGCATCCACTGAGTCGCATCAAGGACGAGTCCATGGGTGGCTTTAACGAGATCACGCTGAGACGGATGCCACTGGACAACGACGAATCGGAGTCCAGGGGATCTTAGTCTTGGAACACACATGGTACATATCTTGAGCATTACCCTACGTTACCCTACGCTAAGCTTCTACTAGCTTCTACTAGCACTGACACAAACTCCCACCCACACACTTATACGAATATA

Full Affymetrix probeset data:

Annotations for 1639732_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720