FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639740_a_at:

>probe:Drosophila_2:1639740_a_at:98:81; Interrogation_Position=1022; Antisense; AGGTCCAGTTGGAGTCATCCCGGGA
>probe:Drosophila_2:1639740_a_at:320:85; Interrogation_Position=1049; Antisense; AGTGATCGGATCAGCGCCTTTGCGC
>probe:Drosophila_2:1639740_a_at:7:317; Interrogation_Position=1064; Antisense; GCCTTTGCGCTCCAACAGTCTGGGA
>probe:Drosophila_2:1639740_a_at:364:587; Interrogation_Position=1100; Antisense; TGGAGACTTCTACTCCACGCAACAG
>probe:Drosophila_2:1639740_a_at:62:115; Interrogation_Position=1144; Antisense; AGCAGCAGCAGGACGTGCTCCGTGA
>probe:Drosophila_2:1639740_a_at:22:115; Interrogation_Position=1171; Antisense; AGCAGCAGTCGGTGGCCCATCAGTT
>probe:Drosophila_2:1639740_a_at:496:101; Interrogation_Position=1228; Antisense; AGAGCTATGGGATGGCCGTTCCCAT
>probe:Drosophila_2:1639740_a_at:187:237; Interrogation_Position=1285; Antisense; AATCGCCGGACGTCTCTCATGTGAG
>probe:Drosophila_2:1639740_a_at:647:511; Interrogation_Position=1305; Antisense; GTGAGCTTCTCAAGCGGCAATCTCA
>probe:Drosophila_2:1639740_a_at:617:565; Interrogation_Position=1320; Antisense; GGCAATCTCAACTACAGCTTCTAAT
>probe:Drosophila_2:1639740_a_at:563:443; Interrogation_Position=1348; Antisense; GATGAGCTGTTATTCCAAGGACTTC
>probe:Drosophila_2:1639740_a_at:11:501; Interrogation_Position=940; Antisense; GTCGGCCGCAGTTCAGCAACAATGG
>probe:Drosophila_2:1639740_a_at:654:123; Interrogation_Position=976; Antisense; AGCGCCTTGCATCCGGATCCATTGT
>probe:Drosophila_2:1639740_a_at:380:273; Interrogation_Position=995; Antisense; CATTGTGCCCGGAGGTCCAGTAAGA

Paste this into a BLAST search page for me
AGGTCCAGTTGGAGTCATCCCGGGAAGTGATCGGATCAGCGCCTTTGCGCGCCTTTGCGCTCCAACAGTCTGGGATGGAGACTTCTACTCCACGCAACAGAGCAGCAGCAGGACGTGCTCCGTGAAGCAGCAGTCGGTGGCCCATCAGTTAGAGCTATGGGATGGCCGTTCCCATAATCGCCGGACGTCTCTCATGTGAGGTGAGCTTCTCAAGCGGCAATCTCAGGCAATCTCAACTACAGCTTCTAATGATGAGCTGTTATTCCAAGGACTTCGTCGGCCGCAGTTCAGCAACAATGGAGCGCCTTGCATCCGGATCCATTGTCATTGTGCCCGGAGGTCCAGTAAGA

Full Affymetrix probeset data:

Annotations for 1639740_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720