FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639743_s_at:

>probe:Drosophila_2:1639743_s_at:214:273; Interrogation_Position=3085; Antisense; CATATGCTTAGCTCTATTGGGTTAG
>probe:Drosophila_2:1639743_s_at:513:691; Interrogation_Position=3099; Antisense; TATTGGGTTAGAATCCGCTCCTAGC
>probe:Drosophila_2:1639743_s_at:82:299; Interrogation_Position=3114; Antisense; CGCTCCTAGCTCCACAAAGTATATA
>probe:Drosophila_2:1639743_s_at:617:59; Interrogation_Position=3144; Antisense; ATGTATATGCATACCATAGCCGCAG
>probe:Drosophila_2:1639743_s_at:609:21; Interrogation_Position=3174; Antisense; ATATTTGCATACAGTCCACACGACA
>probe:Drosophila_2:1639743_s_at:403:173; Interrogation_Position=3198; Antisense; AAACCGATCCTAGTTGCACCCAAAT
>probe:Drosophila_2:1639743_s_at:212:257; Interrogation_Position=3218; Antisense; CAAATCGCAATCCTAAGACCCCAAA
>probe:Drosophila_2:1639743_s_at:214:201; Interrogation_Position=3243; Antisense; AACCCGACCAACATACGTAATCTGC
>probe:Drosophila_2:1639743_s_at:377:493; Interrogation_Position=3259; Antisense; GTAATCTGCAAACACCGCAACATGT
>probe:Drosophila_2:1639743_s_at:86:475; Interrogation_Position=3311; Antisense; GTTAGAGCTCCCTCATCAGAACTAA
>probe:Drosophila_2:1639743_s_at:42:159; Interrogation_Position=3453; Antisense; ACACATATGTATGTTCCCCGAACTA
>probe:Drosophila_2:1639743_s_at:594:681; Interrogation_Position=3519; Antisense; TATTTATCCGGAACTGCGCTACTTG
>probe:Drosophila_2:1639743_s_at:165:515; Interrogation_Position=3573; Antisense; GTGTTGCTTTAGTTATGGTTCCCTA
>probe:Drosophila_2:1639743_s_at:426:589; Interrogation_Position=3588; Antisense; TGGTTCCCTATTTACTTTTATGCGT

Paste this into a BLAST search page for me
CATATGCTTAGCTCTATTGGGTTAGTATTGGGTTAGAATCCGCTCCTAGCCGCTCCTAGCTCCACAAAGTATATAATGTATATGCATACCATAGCCGCAGATATTTGCATACAGTCCACACGACAAAACCGATCCTAGTTGCACCCAAATCAAATCGCAATCCTAAGACCCCAAAAACCCGACCAACATACGTAATCTGCGTAATCTGCAAACACCGCAACATGTGTTAGAGCTCCCTCATCAGAACTAAACACATATGTATGTTCCCCGAACTATATTTATCCGGAACTGCGCTACTTGGTGTTGCTTTAGTTATGGTTCCCTATGGTTCCCTATTTACTTTTATGCGT

Full Affymetrix probeset data:

Annotations for 1639743_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720