FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639759_s_at:

>probe:Drosophila_2:1639759_s_at:330:59; Interrogation_Position=1952; Antisense; ATGTTGATGCCGACCCGGACGTGCC
>probe:Drosophila_2:1639759_s_at:56:583; Interrogation_Position=1986; Antisense; TGGCGATAGTTGTGCTAATCCTAGC
>probe:Drosophila_2:1639759_s_at:689:653; Interrogation_Position=2001; Antisense; TAATCCTAGCGTTAGCAACGGAAGT
>probe:Drosophila_2:1639759_s_at:312:233; Interrogation_Position=2031; Antisense; AATGCTCACTGCGAATAGCAACTCA
>probe:Drosophila_2:1639759_s_at:628:359; Interrogation_Position=2048; Antisense; GCAACTCATGCTTTCTATTTATACA
>probe:Drosophila_2:1639759_s_at:666:137; Interrogation_Position=2091; Antisense; ACGTGTACCCCACAAAGGCATACTT
>probe:Drosophila_2:1639759_s_at:233:363; Interrogation_Position=2138; Antisense; GAATTAATCATTTACTAGTCCCAAC
>probe:Drosophila_2:1639759_s_at:435:185; Interrogation_Position=2164; Antisense; AAAATTATTGTGTTGGAGCTCCTCA
>probe:Drosophila_2:1639759_s_at:500:587; Interrogation_Position=2177; Antisense; TGGAGCTCCTCACTGAAATCTGTCA
>probe:Drosophila_2:1639759_s_at:243:165; Interrogation_Position=2192; Antisense; AAATCTGTCACAAGGCGTCAAATAT
>probe:Drosophila_2:1639759_s_at:667:427; Interrogation_Position=2221; Antisense; GAGATAACGAAGTATTGTCACCAAT
>probe:Drosophila_2:1639759_s_at:27:489; Interrogation_Position=2237; Antisense; GTCACCAATTGCGACTTACCTAAAG
>probe:Drosophila_2:1639759_s_at:618:163; Interrogation_Position=2270; Antisense; AAATATTGCCTTATCCGCGAAAGAT
>probe:Drosophila_2:1639759_s_at:129:103; Interrogation_Position=2366; Antisense; AGACATTTATTCACGTTTTACATTA

Paste this into a BLAST search page for me
ATGTTGATGCCGACCCGGACGTGCCTGGCGATAGTTGTGCTAATCCTAGCTAATCCTAGCGTTAGCAACGGAAGTAATGCTCACTGCGAATAGCAACTCAGCAACTCATGCTTTCTATTTATACAACGTGTACCCCACAAAGGCATACTTGAATTAATCATTTACTAGTCCCAACAAAATTATTGTGTTGGAGCTCCTCATGGAGCTCCTCACTGAAATCTGTCAAAATCTGTCACAAGGCGTCAAATATGAGATAACGAAGTATTGTCACCAATGTCACCAATTGCGACTTACCTAAAGAAATATTGCCTTATCCGCGAAAGATAGACATTTATTCACGTTTTACATTA

Full Affymetrix probeset data:

Annotations for 1639759_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720