FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639773_s_at:

>probe:Drosophila_2:1639773_s_at:474:441; Interrogation_Position=1312; Antisense; GATGGTCCAAAACAGGATCACGCTG
>probe:Drosophila_2:1639773_s_at:663:181; Interrogation_Position=1320; Antisense; AAAACAGGATCACGCTGCGGCCAAA
>probe:Drosophila_2:1639773_s_at:182:623; Interrogation_Position=1335; Antisense; TGCGGCCAAACAGTTCGTTCTGAAA
>probe:Drosophila_2:1639773_s_at:172:471; Interrogation_Position=1351; Antisense; GTTCTGAAAAAGTACTTGGCCTGCA
>probe:Drosophila_2:1639773_s_at:372:217; Interrogation_Position=1360; Antisense; AAGTACTTGGCCTGCAATCCAGATC
>probe:Drosophila_2:1639773_s_at:470:615; Interrogation_Position=1372; Antisense; TGCAATCCAGATCCCGAACGTCAAT
>probe:Drosophila_2:1639773_s_at:720:259; Interrogation_Position=1379; Antisense; CAGATCCCGAACGTCAATGCTATTC
>probe:Drosophila_2:1639773_s_at:282:53; Interrogation_Position=1395; Antisense; ATGCTATTCGCATTTCACAACGGCC
>probe:Drosophila_2:1639773_s_at:322:635; Interrogation_Position=1402; Antisense; TCGCATTTCACAACGGCCACAGATA
>probe:Drosophila_2:1639773_s_at:586:141; Interrogation_Position=1414; Antisense; ACGGCCACAGATACCGAAAACATCA
>probe:Drosophila_2:1639773_s_at:665:33; Interrogation_Position=1435; Antisense; ATCAAACTTGTGTTCTGCGCTGTCA
>probe:Drosophila_2:1639773_s_at:649:513; Interrogation_Position=1444; Antisense; GTGTTCTGCGCTGTCAAAGATACAA
>probe:Drosophila_2:1639773_s_at:488:709; Interrogation_Position=1492; Antisense; TTCAATTTGGGCTAAGGCGGGCAGT
>probe:Drosophila_2:1639773_s_at:239:459; Interrogation_Position=1571; Antisense; GATTTGTTTTTCAAAGTCCCTCAAT

Paste this into a BLAST search page for me
GATGGTCCAAAACAGGATCACGCTGAAAACAGGATCACGCTGCGGCCAAATGCGGCCAAACAGTTCGTTCTGAAAGTTCTGAAAAAGTACTTGGCCTGCAAAGTACTTGGCCTGCAATCCAGATCTGCAATCCAGATCCCGAACGTCAATCAGATCCCGAACGTCAATGCTATTCATGCTATTCGCATTTCACAACGGCCTCGCATTTCACAACGGCCACAGATAACGGCCACAGATACCGAAAACATCAATCAAACTTGTGTTCTGCGCTGTCAGTGTTCTGCGCTGTCAAAGATACAATTCAATTTGGGCTAAGGCGGGCAGTGATTTGTTTTTCAAAGTCCCTCAAT

Full Affymetrix probeset data:

Annotations for 1639773_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720