FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639776_s_at:

>probe:Drosophila_2:1639776_s_at:99:139; Interrogation_Position=3289; Antisense; ACGATACAATAGAATGCGCGCTTTT
>probe:Drosophila_2:1639776_s_at:596:321; Interrogation_Position=3304; Antisense; GCGCGCTTTTAAATGCACTGGAAGA
>probe:Drosophila_2:1639776_s_at:258:9; Interrogation_Position=3333; Antisense; ATTCCAGCATTTTAAATCGGCGCAT
>probe:Drosophila_2:1639776_s_at:592:99; Interrogation_Position=3407; Antisense; AGAGCTACAATCTCTCTAGCGAAAG
>probe:Drosophila_2:1639776_s_at:488:423; Interrogation_Position=3454; Antisense; GAGAAATCTGCTTCATGTCCTCGAG
>probe:Drosophila_2:1639776_s_at:615:597; Interrogation_Position=3469; Antisense; TGTCCTCGAGCGTAATGCATTTATA
>probe:Drosophila_2:1639776_s_at:717:191; Interrogation_Position=3512; Antisense; AACTATATTGCTGCTCTCAAACCGC
>probe:Drosophila_2:1639776_s_at:634:651; Interrogation_Position=3528; Antisense; TCAAACCGCATTAACCCGCAAAGTT
>probe:Drosophila_2:1639776_s_at:153:653; Interrogation_Position=3570; Antisense; TCAAAATGTTTTGCGCCAGGCTTCT
>probe:Drosophila_2:1639776_s_at:291:309; Interrogation_Position=3585; Antisense; CCAGGCTTCTGTGCAGGGCGGCATT
>probe:Drosophila_2:1639776_s_at:409:81; Interrogation_Position=3599; Antisense; AGGGCGGCATTTCCAAATTTCCGAT
>probe:Drosophila_2:1639776_s_at:67:721; Interrogation_Position=3609; Antisense; TTCCAAATTTCCGATGTCCCATCAG
>probe:Drosophila_2:1639776_s_at:558:409; Interrogation_Position=3690; Antisense; GACGACAGGCGGTGCTAGTTATTAA
>probe:Drosophila_2:1639776_s_at:228:385; Interrogation_Position=3715; Antisense; GAACTTCTGAGAGACTTGGTTTAAT

Paste this into a BLAST search page for me
ACGATACAATAGAATGCGCGCTTTTGCGCGCTTTTAAATGCACTGGAAGAATTCCAGCATTTTAAATCGGCGCATAGAGCTACAATCTCTCTAGCGAAAGGAGAAATCTGCTTCATGTCCTCGAGTGTCCTCGAGCGTAATGCATTTATAAACTATATTGCTGCTCTCAAACCGCTCAAACCGCATTAACCCGCAAAGTTTCAAAATGTTTTGCGCCAGGCTTCTCCAGGCTTCTGTGCAGGGCGGCATTAGGGCGGCATTTCCAAATTTCCGATTTCCAAATTTCCGATGTCCCATCAGGACGACAGGCGGTGCTAGTTATTAAGAACTTCTGAGAGACTTGGTTTAAT

Full Affymetrix probeset data:

Annotations for 1639776_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720