FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639785_s_at:

>probe:Drosophila_2:1639785_s_at:520:341; Interrogation_Position=3868; Antisense; GCTTAACATACATACTTTCGCGCAT
>probe:Drosophila_2:1639785_s_at:648:677; Interrogation_Position=3915; Antisense; TAGATCCGATCATCCAGTCACGAAT
>probe:Drosophila_2:1639785_s_at:233:89; Interrogation_Position=3930; Antisense; AGTCACGAATCATCATGGGCATAGC
>probe:Drosophila_2:1639785_s_at:234:595; Interrogation_Position=3945; Antisense; TGGGCATAGCTGAAACCGAGTTTAA
>probe:Drosophila_2:1639785_s_at:181:427; Interrogation_Position=3962; Antisense; GAGTTTAACTGACATTCATCGACAT
>probe:Drosophila_2:1639785_s_at:203:635; Interrogation_Position=3980; Antisense; TCGACATATTTACCCATCCATCCAT
>probe:Drosophila_2:1639785_s_at:46:147; Interrogation_Position=4019; Antisense; ACTCATACCGATCATGCATCACAGG
>probe:Drosophila_2:1639785_s_at:203:347; Interrogation_Position=4034; Antisense; GCATCACAGGGCTTTGTTTTTCGTT
>probe:Drosophila_2:1639785_s_at:667:151; Interrogation_Position=4096; Antisense; ACAGGATACAGATTCACGGCAGGTT
>probe:Drosophila_2:1639785_s_at:312:401; Interrogation_Position=4226; Antisense; GACTCAATGTGTTCATTAGCATTTA
>probe:Drosophila_2:1639785_s_at:120:17; Interrogation_Position=4246; Antisense; ATTTAGTAGACTTAGCGGGCGTGGC
>probe:Drosophila_2:1639785_s_at:600:147; Interrogation_Position=4255; Antisense; ACTTAGCGGGCGTGGCATAGTGAAA
>probe:Drosophila_2:1639785_s_at:296:235; Interrogation_Position=4290; Antisense; AATCCAGAGCAATATAAGGGCGTAT
>probe:Drosophila_2:1639785_s_at:516:705; Interrogation_Position=4326; Antisense; TTAGGTGACATGTTCCTCGCAAAAG

Paste this into a BLAST search page for me
GCTTAACATACATACTTTCGCGCATTAGATCCGATCATCCAGTCACGAATAGTCACGAATCATCATGGGCATAGCTGGGCATAGCTGAAACCGAGTTTAAGAGTTTAACTGACATTCATCGACATTCGACATATTTACCCATCCATCCATACTCATACCGATCATGCATCACAGGGCATCACAGGGCTTTGTTTTTCGTTACAGGATACAGATTCACGGCAGGTTGACTCAATGTGTTCATTAGCATTTAATTTAGTAGACTTAGCGGGCGTGGCACTTAGCGGGCGTGGCATAGTGAAAAATCCAGAGCAATATAAGGGCGTATTTAGGTGACATGTTCCTCGCAAAAG

Full Affymetrix probeset data:

Annotations for 1639785_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720