FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639869_a_at:

>probe:Drosophila_2:1639869_a_at:370:633; Interrogation_Position=3037; Antisense; TCCCAGCTATAGTACCGACTCGGAA
>probe:Drosophila_2:1639869_a_at:631:143; Interrogation_Position=3054; Antisense; ACTCGGAACTTCCACTGACTGGCGA
>probe:Drosophila_2:1639869_a_at:630:303; Interrogation_Position=3138; Antisense; CCTGGTCCCGGGAAATGGCCAATGA
>probe:Drosophila_2:1639869_a_at:89:227; Interrogation_Position=3151; Antisense; AATGGCCAATGAGCGGAAGCGGTTA
>probe:Drosophila_2:1639869_a_at:277:281; Interrogation_Position=3235; Antisense; CTCCGACATTTCCATCAACTGATTT
>probe:Drosophila_2:1639869_a_at:168:193; Interrogation_Position=3251; Antisense; AACTGATTTCATTGATCCGGGTCGC
>probe:Drosophila_2:1639869_a_at:238:47; Interrogation_Position=3265; Antisense; ATCCGGGTCGCCTATGCATTTACAT
>probe:Drosophila_2:1639869_a_at:375:123; Interrogation_Position=3293; Antisense; AGCCCCATATCCTCATACTTACATT
>probe:Drosophila_2:1639869_a_at:5:271; Interrogation_Position=3306; Antisense; CATACTTACATTTTAGCCTAGCCAT
>probe:Drosophila_2:1639869_a_at:463:673; Interrogation_Position=3319; Antisense; TAGCCTAGCCATGTTCTGATTGAAG
>probe:Drosophila_2:1639869_a_at:724:277; Interrogation_Position=3467; Antisense; CTGAATAATACGTTTCACGCGTGAA
>probe:Drosophila_2:1639869_a_at:659:571; Interrogation_Position=3497; Antisense; GGCTAGTTTATCTATGTAGTCTCAA
>probe:Drosophila_2:1639869_a_at:273:201; Interrogation_Position=3559; Antisense; AACCCACCTGAATTAAAGCCATGAG
>probe:Drosophila_2:1639869_a_at:393:203; Interrogation_Position=3574; Antisense; AAGCCATGAGCAACCTATGATTATT

Paste this into a BLAST search page for me
TCCCAGCTATAGTACCGACTCGGAAACTCGGAACTTCCACTGACTGGCGACCTGGTCCCGGGAAATGGCCAATGAAATGGCCAATGAGCGGAAGCGGTTACTCCGACATTTCCATCAACTGATTTAACTGATTTCATTGATCCGGGTCGCATCCGGGTCGCCTATGCATTTACATAGCCCCATATCCTCATACTTACATTCATACTTACATTTTAGCCTAGCCATTAGCCTAGCCATGTTCTGATTGAAGCTGAATAATACGTTTCACGCGTGAAGGCTAGTTTATCTATGTAGTCTCAAAACCCACCTGAATTAAAGCCATGAGAAGCCATGAGCAACCTATGATTATT

Full Affymetrix probeset data:

Annotations for 1639869_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720