FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639876_a_at:

>probe:Drosophila_2:1639876_a_at:587:433; Interrogation_Position=2189; Antisense; GAGTGAGTTCCTCCGGTAAGACTAG
>probe:Drosophila_2:1639876_a_at:25:131; Interrogation_Position=2216; Antisense; ACCGAACTAAACTGGAGCCCGTCAG
>probe:Drosophila_2:1639876_a_at:538:495; Interrogation_Position=2236; Antisense; GTCAGCTCCTTTCGCTGGGTCACCA
>probe:Drosophila_2:1639876_a_at:207:593; Interrogation_Position=2251; Antisense; TGGGTCACCATCTCAGTGGGAGCGA
>probe:Drosophila_2:1639876_a_at:301:359; Interrogation_Position=2310; Antisense; GCAACGAGTTCATTTGCTGGCCGAA
>probe:Drosophila_2:1639876_a_at:441:19; Interrogation_Position=2321; Antisense; ATTTGCTGGCCGAACACATCGGCGT
>probe:Drosophila_2:1639876_a_at:418:41; Interrogation_Position=2338; Antisense; ATCGGCGTTGTCTCTCCAAGAATTA
>probe:Drosophila_2:1639876_a_at:696:31; Interrogation_Position=2369; Antisense; ATAATTGTACCCGTGAAATCATTTC
>probe:Drosophila_2:1639876_a_at:327:509; Interrogation_Position=2381; Antisense; GTGAAATCATTTCATCCCCTACCTA
>probe:Drosophila_2:1639876_a_at:123:297; Interrogation_Position=2397; Antisense; CCCTACCTACCTATCACTAATTGTA
>probe:Drosophila_2:1639876_a_at:523:509; Interrogation_Position=2471; Antisense; GTGCAAAATTATTCCCATAAATCGC
>probe:Drosophila_2:1639876_a_at:177:21; Interrogation_Position=2527; Antisense; ATATCATGTATTTCGCACATTCATA
>probe:Drosophila_2:1639876_a_at:375:695; Interrogation_Position=2562; Antisense; TTATGCTAGTTATATTGTTTACCAC
>probe:Drosophila_2:1639876_a_at:698:711; Interrogation_Position=2576; Antisense; TTGTTTACCACTAAGCAACGATTAA

Paste this into a BLAST search page for me
GAGTGAGTTCCTCCGGTAAGACTAGACCGAACTAAACTGGAGCCCGTCAGGTCAGCTCCTTTCGCTGGGTCACCATGGGTCACCATCTCAGTGGGAGCGAGCAACGAGTTCATTTGCTGGCCGAAATTTGCTGGCCGAACACATCGGCGTATCGGCGTTGTCTCTCCAAGAATTAATAATTGTACCCGTGAAATCATTTCGTGAAATCATTTCATCCCCTACCTACCCTACCTACCTATCACTAATTGTAGTGCAAAATTATTCCCATAAATCGCATATCATGTATTTCGCACATTCATATTATGCTAGTTATATTGTTTACCACTTGTTTACCACTAAGCAACGATTAA

Full Affymetrix probeset data:

Annotations for 1639876_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720