FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639901_a_at:

>probe:Drosophila_2:1639901_a_at:426:245; Interrogation_Position=1808; Antisense; AATTCACCCATTCGTGAGTTTGCCC
>probe:Drosophila_2:1639901_a_at:558:591; Interrogation_Position=1858; Antisense; TGGGTCGTCGGTTCGCCGAAATCGA
>probe:Drosophila_2:1639901_a_at:449:393; Interrogation_Position=1875; Antisense; GAAATCGAGTTGCACACGCTGCTGG
>probe:Drosophila_2:1639901_a_at:31:31; Interrogation_Position=1916; Antisense; ATACAAGGTCTCGTACAATTCCGGA
>probe:Drosophila_2:1639901_a_at:514:91; Interrogation_Position=1942; Antisense; AGTTTGTGTACCGTGTGAACTCCAC
>probe:Drosophila_2:1639901_a_at:270:511; Interrogation_Position=1956; Antisense; GTGAACTCCACGTACATTCCGCAGT
>probe:Drosophila_2:1639901_a_at:488:297; Interrogation_Position=1975; Antisense; CGCAGTCGCCTCTGAATTTCAAACT
>probe:Drosophila_2:1639901_a_at:669:555; Interrogation_Position=2009; Antisense; GGACGAGTGAGCTGTCTGCACCAAA
>probe:Drosophila_2:1639901_a_at:104:71; Interrogation_Position=2043; Antisense; AGGCCCATCATGGAGCTCAAAGCTG
>probe:Drosophila_2:1639901_a_at:420:205; Interrogation_Position=2062; Antisense; AAGCTGCAGTTACACACGGCGGATG
>probe:Drosophila_2:1639901_a_at:724:335; Interrogation_Position=2111; Antisense; GCTGCTGTTGCTATGCTTCATTTTA
>probe:Drosophila_2:1639901_a_at:504:421; Interrogation_Position=2154; Antisense; GAGCACAGTTCCGACAAATTCAGTA
>probe:Drosophila_2:1639901_a_at:351:531; Interrogation_Position=2207; Antisense; GGGTGCGTGTGCGAGTAACTAAACT
>probe:Drosophila_2:1639901_a_at:380:45; Interrogation_Position=2283; Antisense; ATCCGCCCCATGCTTTAGTAGTAGT

Paste this into a BLAST search page for me
AATTCACCCATTCGTGAGTTTGCCCTGGGTCGTCGGTTCGCCGAAATCGAGAAATCGAGTTGCACACGCTGCTGGATACAAGGTCTCGTACAATTCCGGAAGTTTGTGTACCGTGTGAACTCCACGTGAACTCCACGTACATTCCGCAGTCGCAGTCGCCTCTGAATTTCAAACTGGACGAGTGAGCTGTCTGCACCAAAAGGCCCATCATGGAGCTCAAAGCTGAAGCTGCAGTTACACACGGCGGATGGCTGCTGTTGCTATGCTTCATTTTAGAGCACAGTTCCGACAAATTCAGTAGGGTGCGTGTGCGAGTAACTAAACTATCCGCCCCATGCTTTAGTAGTAGT

Full Affymetrix probeset data:

Annotations for 1639901_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720