FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639947_s_at:

>probe:Drosophila_2:1639947_s_at:83:609; Interrogation_Position=2619; Antisense; TGAGTGCATCGAGCTCCAGTTCGGA
>probe:Drosophila_2:1639947_s_at:64:465; Interrogation_Position=2648; Antisense; GATTCCAGCGACAGTGACAGCGGTA
>probe:Drosophila_2:1639947_s_at:617:399; Interrogation_Position=2684; Antisense; GACAGCACAGAGGACGATCGCTCCA
>probe:Drosophila_2:1639947_s_at:564:349; Interrogation_Position=2710; Antisense; GCAGGGCCAACAGCAGGATCACCAG
>probe:Drosophila_2:1639947_s_at:219:353; Interrogation_Position=2746; Antisense; GCAGCAGCATCAGGTCTATCAGAAT
>probe:Drosophila_2:1639947_s_at:481:187; Interrogation_Position=2775; Antisense; AACACACTCAACAGCAGGTGGCGCA
>probe:Drosophila_2:1639947_s_at:346:23; Interrogation_Position=2840; Antisense; ATATCACCAGCATATGGCAGCAGTC
>probe:Drosophila_2:1639947_s_at:346:649; Interrogation_Position=2878; Antisense; TCAGCAGCAGATGCTTCCACATCAA
>probe:Drosophila_2:1639947_s_at:413:187; Interrogation_Position=2916; Antisense; AACAGTCCGGCATTTATGCGTCCAA
>probe:Drosophila_2:1639947_s_at:141:51; Interrogation_Position=2931; Antisense; ATGCGTCCAATGGTGGCTTTCCAAA
>probe:Drosophila_2:1639947_s_at:649:581; Interrogation_Position=2944; Antisense; TGGCTTTCCAAACGATTTCCTACAA
>probe:Drosophila_2:1639947_s_at:618:281; Interrogation_Position=2975; Antisense; CTGCAGTTGTCGTCAAATTCGTCCG
>probe:Drosophila_2:1639947_s_at:506:293; Interrogation_Position=3001; Antisense; CGATGACGACGACTAGCTGTTTAAA
>probe:Drosophila_2:1639947_s_at:352:453; Interrogation_Position=3030; Antisense; GATCTTATTTGCCTTCTTTTGACTA

Paste this into a BLAST search page for me
TGAGTGCATCGAGCTCCAGTTCGGAGATTCCAGCGACAGTGACAGCGGTAGACAGCACAGAGGACGATCGCTCCAGCAGGGCCAACAGCAGGATCACCAGGCAGCAGCATCAGGTCTATCAGAATAACACACTCAACAGCAGGTGGCGCAATATCACCAGCATATGGCAGCAGTCTCAGCAGCAGATGCTTCCACATCAAAACAGTCCGGCATTTATGCGTCCAAATGCGTCCAATGGTGGCTTTCCAAATGGCTTTCCAAACGATTTCCTACAACTGCAGTTGTCGTCAAATTCGTCCGCGATGACGACGACTAGCTGTTTAAAGATCTTATTTGCCTTCTTTTGACTA

Full Affymetrix probeset data:

Annotations for 1639947_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720