FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639953_at:

>probe:Drosophila_2:1639953_at:464:485; Interrogation_Position=1997; Antisense; GTAGTATGTTCTCTGTCTTTGTTTA
>probe:Drosophila_2:1639953_at:661:701; Interrogation_Position=2023; Antisense; TTATATGTTCGTGCACTTGTCCTAG
>probe:Drosophila_2:1639953_at:687:355; Interrogation_Position=2035; Antisense; GCACTTGTCCTAGTCCATTATTGTA
>probe:Drosophila_2:1639953_at:538:177; Interrogation_Position=2094; Antisense; AAACTTCTCAATTTTTCGCTGTCTG
>probe:Drosophila_2:1639953_at:583:635; Interrogation_Position=2109; Antisense; TCGCTGTCTGTGATTTGTTTTGCCA
>probe:Drosophila_2:1639953_at:160:315; Interrogation_Position=2136; Antisense; GCCATTGATTTTCTGCACACTTTTT
>probe:Drosophila_2:1639953_at:516:723; Interrogation_Position=2159; Antisense; TTGCTGCTATCCCAAAAGCTGTGTA
>probe:Drosophila_2:1639953_at:216:325; Interrogation_Position=2205; Antisense; GCGCAAGCAGCTGAAAACTTCTCTT
>probe:Drosophila_2:1639953_at:80:519; Interrogation_Position=2365; Antisense; GTGGGTCAAAATTCGGCATGCTCCT
>probe:Drosophila_2:1639953_at:408:163; Interrogation_Position=2373; Antisense; AAATTCGGCATGCTCCTGTATCACA
>probe:Drosophila_2:1639953_at:160:297; Interrogation_Position=2428; Antisense; CGCAGTGGGCGTGGTACGTATACAT
>probe:Drosophila_2:1639953_at:644:415; Interrogation_Position=2455; Antisense; GAGCCATGCTGCATTTTGGCCGTAA
>probe:Drosophila_2:1639953_at:535:167; Interrogation_Position=2483; Antisense; AAATGCACTGCTTTACTTGGAAAAT
>probe:Drosophila_2:1639953_at:106:719; Interrogation_Position=2507; Antisense; TTCGCTTGCACAAAATCAACGCCGC

Paste this into a BLAST search page for me
GTAGTATGTTCTCTGTCTTTGTTTATTATATGTTCGTGCACTTGTCCTAGGCACTTGTCCTAGTCCATTATTGTAAAACTTCTCAATTTTTCGCTGTCTGTCGCTGTCTGTGATTTGTTTTGCCAGCCATTGATTTTCTGCACACTTTTTTTGCTGCTATCCCAAAAGCTGTGTAGCGCAAGCAGCTGAAAACTTCTCTTGTGGGTCAAAATTCGGCATGCTCCTAAATTCGGCATGCTCCTGTATCACACGCAGTGGGCGTGGTACGTATACATGAGCCATGCTGCATTTTGGCCGTAAAAATGCACTGCTTTACTTGGAAAATTTCGCTTGCACAAAATCAACGCCGC

Full Affymetrix probeset data:

Annotations for 1639953_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720