FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639966_a_at:

>probe:Drosophila_2:1639966_a_at:49:47; Interrogation_Position=330; Antisense; ATCCCGCCGCAAAACTACAATGTAA
>probe:Drosophila_2:1639966_a_at:335:679; Interrogation_Position=365; Antisense; TATGGGCATGCTGACACCTGTAGAG
>probe:Drosophila_2:1639966_a_at:608:599; Interrogation_Position=383; Antisense; TGTAGAGACCTCTGTTATCTGGCGA
>probe:Drosophila_2:1639966_a_at:266:327; Interrogation_Position=404; Antisense; GCGAGGTCCTCTTGTAATGTCAGCA
>probe:Drosophila_2:1639966_a_at:450:677; Interrogation_Position=475; Antisense; TAGTTATAGATACTCCACCGGGCAC
>probe:Drosophila_2:1639966_a_at:515:261; Interrogation_Position=490; Antisense; CACCGGGCACTGGAGATGTACATCT
>probe:Drosophila_2:1639966_a_at:296:591; Interrogation_Position=553; Antisense; TGGTAACAACACCTCATACTGCAGC
>probe:Drosophila_2:1639966_a_at:283:27; Interrogation_Position=568; Antisense; ATACTGCAGCTGTTCAGGTGACCTT
>probe:Drosophila_2:1639966_a_at:77:167; Interrogation_Position=620; Antisense; AAATGTTCCTATCTTTGGCGTAGTA
>probe:Drosophila_2:1639966_a_at:675:399; Interrogation_Position=702; Antisense; GACAGCCGTATAAGTTCTCTACCGC
>probe:Drosophila_2:1639966_a_at:364:621; Interrogation_Position=719; Antisense; TCTACCGCGCAAGCTAATTTCTCTT
>probe:Drosophila_2:1639966_a_at:532:17; Interrogation_Position=735; Antisense; ATTTCTCTTCCGTTAGACTCACGAA
>probe:Drosophila_2:1639966_a_at:55:17; Interrogation_Position=800; Antisense; ATATCCGGACAGCAAGTACTCTTAT
>probe:Drosophila_2:1639966_a_at:17:277; Interrogation_Position=820; Antisense; CTTATCTATTTACCCAATTGGCTGA

Paste this into a BLAST search page for me
ATCCCGCCGCAAAACTACAATGTAATATGGGCATGCTGACACCTGTAGAGTGTAGAGACCTCTGTTATCTGGCGAGCGAGGTCCTCTTGTAATGTCAGCATAGTTATAGATACTCCACCGGGCACCACCGGGCACTGGAGATGTACATCTTGGTAACAACACCTCATACTGCAGCATACTGCAGCTGTTCAGGTGACCTTAAATGTTCCTATCTTTGGCGTAGTAGACAGCCGTATAAGTTCTCTACCGCTCTACCGCGCAAGCTAATTTCTCTTATTTCTCTTCCGTTAGACTCACGAAATATCCGGACAGCAAGTACTCTTATCTTATCTATTTACCCAATTGGCTGA

Full Affymetrix probeset data:

Annotations for 1639966_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720