FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639974_a_at:

>probe:Drosophila_2:1639974_a_at:311:675; Interrogation_Position=1027; Antisense; TAGCCTCCAATATCGGTACCATAAT
>probe:Drosophila_2:1639974_a_at:464:133; Interrogation_Position=1067; Antisense; ACGCGTCGACGTTGAAGTGGGCCAT
>probe:Drosophila_2:1639974_a_at:547:195; Interrogation_Position=1153; Antisense; AACTGGCTGTCGATCATAAGTCGGT
>probe:Drosophila_2:1639974_a_at:5:33; Interrogation_Position=1168; Antisense; ATAAGTCGGTGGTGCACATGCTGGA
>probe:Drosophila_2:1639974_a_at:9:587; Interrogation_Position=1189; Antisense; TGGAGACCCGGAGCAATCGCCTGGA
>probe:Drosophila_2:1639974_a_at:89:403; Interrogation_Position=1282; Antisense; GACTTGGCGAACTGGAGCGATCCGT
>probe:Drosophila_2:1639974_a_at:96:415; Interrogation_Position=1296; Antisense; GAGCGATCCGTTACTGAAGCTTACG
>probe:Drosophila_2:1639974_a_at:217:219; Interrogation_Position=1359; Antisense; AAGTCTCAAATGGATCGCTGCATAA
>probe:Drosophila_2:1639974_a_at:542:431; Interrogation_Position=1416; Antisense; GAGGGCATGGAGGACATCACGCAAC
>probe:Drosophila_2:1639974_a_at:380:33; Interrogation_Position=1431; Antisense; ATCACGCAACGCTTCGAATCGGAAA
>probe:Drosophila_2:1639974_a_at:582:107; Interrogation_Position=1474; Antisense; AGAACTCCGTGCTGCTGGCGGAAAA
>probe:Drosophila_2:1639974_a_at:641:293; Interrogation_Position=1499; Antisense; CGAACTGCTTAAGAGCGGTGCCGCA
>probe:Drosophila_2:1639974_a_at:208:349; Interrogation_Position=1521; Antisense; GCAGGCGATAGCTCCAAGCAGACTT
>probe:Drosophila_2:1639974_a_at:568:399; Interrogation_Position=1541; Antisense; GACTTCACGCTGATTTTACGGTTGT

Paste this into a BLAST search page for me
TAGCCTCCAATATCGGTACCATAATACGCGTCGACGTTGAAGTGGGCCATAACTGGCTGTCGATCATAAGTCGGTATAAGTCGGTGGTGCACATGCTGGATGGAGACCCGGAGCAATCGCCTGGAGACTTGGCGAACTGGAGCGATCCGTGAGCGATCCGTTACTGAAGCTTACGAAGTCTCAAATGGATCGCTGCATAAGAGGGCATGGAGGACATCACGCAACATCACGCAACGCTTCGAATCGGAAAAGAACTCCGTGCTGCTGGCGGAAAACGAACTGCTTAAGAGCGGTGCCGCAGCAGGCGATAGCTCCAAGCAGACTTGACTTCACGCTGATTTTACGGTTGT

Full Affymetrix probeset data:

Annotations for 1639974_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720