FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640027_a_at:

>probe:Drosophila_2:1640027_a_at:633:411; Interrogation_Position=1071; Antisense; GACCGAATTCATAGGCTTTTCCGAT
>probe:Drosophila_2:1640027_a_at:274:681; Interrogation_Position=1119; Antisense; TATGGGATTATTCCTCGGCTTCAGC
>probe:Drosophila_2:1640027_a_at:174:343; Interrogation_Position=1136; Antisense; GCTTCAGCTTTCTATCCATTGCAGA
>probe:Drosophila_2:1640027_a_at:628:265; Interrogation_Position=1157; Antisense; CAGAGTGTGTGTACTTCGCCTTGAT
>probe:Drosophila_2:1640027_a_at:41:263; Interrogation_Position=1289; Antisense; CAGCCGATTGGTTTCAGGCCGAATT
>probe:Drosophila_2:1640027_a_at:48:513; Interrogation_Position=769; Antisense; GTGACCTTCTATATGCCCAGATTGA
>probe:Drosophila_2:1640027_a_at:146:325; Interrogation_Position=796; Antisense; GCGAACGATACTATATGCCCACTGC
>probe:Drosophila_2:1640027_a_at:449:239; Interrogation_Position=872; Antisense; AATCATGTCTTGACGAGTGCCTGCC
>probe:Drosophila_2:1640027_a_at:688:601; Interrogation_Position=901; Antisense; TGTTTCGATCTCAGTTTCAGCGCAA
>probe:Drosophila_2:1640027_a_at:251:123; Interrogation_Position=919; Antisense; AGCGCAATTGCCTATTCGACGAGAA
>probe:Drosophila_2:1640027_a_at:584:135; Interrogation_Position=937; Antisense; ACGAGAATATCGCTGGACGGCTTTA
>probe:Drosophila_2:1640027_a_at:143:407; Interrogation_Position=952; Antisense; GACGGCTTTAGGGAGACACCTTCGA
>probe:Drosophila_2:1640027_a_at:308:467; Interrogation_Position=983; Antisense; GTTGGAACTTTACCGATGCCTATGT
>probe:Drosophila_2:1640027_a_at:52:49; Interrogation_Position=998; Antisense; ATGCCTATGTGGAGCGCAGCGTAGC

Paste this into a BLAST search page for me
GACCGAATTCATAGGCTTTTCCGATTATGGGATTATTCCTCGGCTTCAGCGCTTCAGCTTTCTATCCATTGCAGACAGAGTGTGTGTACTTCGCCTTGATCAGCCGATTGGTTTCAGGCCGAATTGTGACCTTCTATATGCCCAGATTGAGCGAACGATACTATATGCCCACTGCAATCATGTCTTGACGAGTGCCTGCCTGTTTCGATCTCAGTTTCAGCGCAAAGCGCAATTGCCTATTCGACGAGAAACGAGAATATCGCTGGACGGCTTTAGACGGCTTTAGGGAGACACCTTCGAGTTGGAACTTTACCGATGCCTATGTATGCCTATGTGGAGCGCAGCGTAGC

Full Affymetrix probeset data:

Annotations for 1640027_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720