FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640068_at:

>probe:Drosophila_2:1640068_at:56:435; Interrogation_Position=1576; Antisense; GAGGGCGCTAGCAAGTGCACAGATA
>probe:Drosophila_2:1640068_at:14:197; Interrogation_Position=1615; Antisense; AACTGGAACCGCATGCTGGGTACGC
>probe:Drosophila_2:1640068_at:454:633; Interrogation_Position=1652; Antisense; TCTCAGAGCCCCTGGTTAAGGCAAT
>probe:Drosophila_2:1640068_at:569:679; Interrogation_Position=1676; Antisense; TAGTGCTCTTCCTATTGACTTACTG
>probe:Drosophila_2:1640068_at:271:725; Interrogation_Position=1690; Antisense; TTGACTTACTGTGCCCAGGAAGATG
>probe:Drosophila_2:1640068_at:215:73; Interrogation_Position=1706; Antisense; AGGAAGATGACCTGTGGGCCCTGTC
>probe:Drosophila_2:1640068_at:116:511; Interrogation_Position=1719; Antisense; GTGGGCCCTGTCTGAAGGACTAGAT
>probe:Drosophila_2:1640068_at:715:277; Interrogation_Position=1747; Antisense; CTAATGGACATTTTCGCAGTGGACG
>probe:Drosophila_2:1640068_at:573:267; Interrogation_Position=1763; Antisense; CAGTGGACGACTGGCCGCAGATCAT
>probe:Drosophila_2:1640068_at:317:99; Interrogation_Position=1799; Antisense; AGATGTGCGATCGTGTCCAGGCACT
>probe:Drosophila_2:1640068_at:557:473; Interrogation_Position=1833; Antisense; GTTCAAGTCTAAACTGCGGCAGCAG
>probe:Drosophila_2:1640068_at:151:225; Interrogation_Position=1870; Antisense; AAGGAGCGACGAGCCACAGTGCAAA
>probe:Drosophila_2:1640068_at:196:373; Interrogation_Position=1899; Antisense; GAAGACTAATTTTTCACGCTTTGTT
>probe:Drosophila_2:1640068_at:158:493; Interrogation_Position=2071; Antisense; GTAACTTCCTAATTGTCATGTCTTT

Paste this into a BLAST search page for me
GAGGGCGCTAGCAAGTGCACAGATAAACTGGAACCGCATGCTGGGTACGCTCTCAGAGCCCCTGGTTAAGGCAATTAGTGCTCTTCCTATTGACTTACTGTTGACTTACTGTGCCCAGGAAGATGAGGAAGATGACCTGTGGGCCCTGTCGTGGGCCCTGTCTGAAGGACTAGATCTAATGGACATTTTCGCAGTGGACGCAGTGGACGACTGGCCGCAGATCATAGATGTGCGATCGTGTCCAGGCACTGTTCAAGTCTAAACTGCGGCAGCAGAAGGAGCGACGAGCCACAGTGCAAAGAAGACTAATTTTTCACGCTTTGTTGTAACTTCCTAATTGTCATGTCTTT

Full Affymetrix probeset data:

Annotations for 1640068_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720