FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640070_a_at:

>probe:Drosophila_2:1640070_a_at:54:453; Interrogation_Position=2864; Antisense; GATCTGCTCTGAGATGATCTCCATC
>probe:Drosophila_2:1640070_a_at:73:453; Interrogation_Position=2879; Antisense; GATCTCCATCTATGGCAGTAGCATT
>probe:Drosophila_2:1640070_a_at:500:105; Interrogation_Position=2905; Antisense; AGAACTTGGCCAAACGACCCTATAT
>probe:Drosophila_2:1640070_a_at:614:411; Interrogation_Position=2920; Antisense; GACCCTATATTGATCAGTCGCATAT
>probe:Drosophila_2:1640070_a_at:585:453; Interrogation_Position=2931; Antisense; GATCAGTCGCATATTTGCGCCGAGA
>probe:Drosophila_2:1640070_a_at:518:417; Interrogation_Position=2976; Antisense; GAGAAGTCTTCGCTGGCCTTTGCTA
>probe:Drosophila_2:1640070_a_at:144:263; Interrogation_Position=3007; Antisense; CAGCCTAAGTGATGCGTTGTGATGT
>probe:Drosophila_2:1640070_a_at:365:729; Interrogation_Position=3023; Antisense; TTGTGATGTACGAACCAGGCGCGGA
>probe:Drosophila_2:1640070_a_at:206:305; Interrogation_Position=3068; Antisense; CCGATCCCACGCTTTATATATGCAT
>probe:Drosophila_2:1640070_a_at:200:697; Interrogation_Position=3221; Antisense; TTTATAAACGCACTCAAACGCCGGC
>probe:Drosophila_2:1640070_a_at:640:113; Interrogation_Position=3285; Antisense; AGCAGTACCCTTATCGTAATTTCAA
>probe:Drosophila_2:1640070_a_at:138:325; Interrogation_Position=3321; Antisense; GCGAAATTCACGAGCCGCAAACTTT
>probe:Drosophila_2:1640070_a_at:497:295; Interrogation_Position=3336; Antisense; CGCAAACTTTGTATCGATATCCCCA
>probe:Drosophila_2:1640070_a_at:500:457; Interrogation_Position=3351; Antisense; GATATCCCCATGTGTCCGAAGTCAT

Paste this into a BLAST search page for me
GATCTGCTCTGAGATGATCTCCATCGATCTCCATCTATGGCAGTAGCATTAGAACTTGGCCAAACGACCCTATATGACCCTATATTGATCAGTCGCATATGATCAGTCGCATATTTGCGCCGAGAGAGAAGTCTTCGCTGGCCTTTGCTACAGCCTAAGTGATGCGTTGTGATGTTTGTGATGTACGAACCAGGCGCGGACCGATCCCACGCTTTATATATGCATTTTATAAACGCACTCAAACGCCGGCAGCAGTACCCTTATCGTAATTTCAAGCGAAATTCACGAGCCGCAAACTTTCGCAAACTTTGTATCGATATCCCCAGATATCCCCATGTGTCCGAAGTCAT

Full Affymetrix probeset data:

Annotations for 1640070_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720