FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640090_a_at:

>probe:Drosophila_2:1640090_a_at:442:475; Interrogation_Position=3184; Antisense; GTTAGTTGTCCATTCTTCATTTGCA
>probe:Drosophila_2:1640090_a_at:611:603; Interrogation_Position=3212; Antisense; TGATTTCATGTTCGTTTTCCCTAAG
>probe:Drosophila_2:1640090_a_at:280:509; Interrogation_Position=3289; Antisense; GTGCAGAGCATTTGTTCCTCCATCT
>probe:Drosophila_2:1640090_a_at:677:37; Interrogation_Position=3310; Antisense; ATCTCGTGGCCATCCGATCTAAAAT
>probe:Drosophila_2:1640090_a_at:258:653; Interrogation_Position=3342; Antisense; TAATACTGTTCATAGGAGCCTGGGA
>probe:Drosophila_2:1640090_a_at:237:415; Interrogation_Position=3357; Antisense; GAGCCTGGGATAGCCAACCGCGCAT
>probe:Drosophila_2:1640090_a_at:640:323; Interrogation_Position=3376; Antisense; GCGCATACCTATACCTAAACCTAGC
>probe:Drosophila_2:1640090_a_at:27:245; Interrogation_Position=3446; Antisense; AATTTAGCACTTAACGGAGCGATAT
>probe:Drosophila_2:1640090_a_at:524:501; Interrogation_Position=3493; Antisense; GTCGATGGATTAGAGCCCGCTACAA
>probe:Drosophila_2:1640090_a_at:8:49; Interrogation_Position=3550; Antisense; ATCCATATCTGATTTCGCGTTTCGA
>probe:Drosophila_2:1640090_a_at:210:719; Interrogation_Position=3563; Antisense; TTCGCGTTTCGATTTCTCAGACAAC
>probe:Drosophila_2:1640090_a_at:229:399; Interrogation_Position=3598; Antisense; GACAGTCAGACTTGGCCATATACTA
>probe:Drosophila_2:1640090_a_at:17:669; Interrogation_Position=3618; Antisense; TACTAAGCCGCGCAGATCGAACCGA
>probe:Drosophila_2:1640090_a_at:343:447; Interrogation_Position=3632; Antisense; GATCGAACCGACTAGTTTTTCATTA

Paste this into a BLAST search page for me
GTTAGTTGTCCATTCTTCATTTGCATGATTTCATGTTCGTTTTCCCTAAGGTGCAGAGCATTTGTTCCTCCATCTATCTCGTGGCCATCCGATCTAAAATTAATACTGTTCATAGGAGCCTGGGAGAGCCTGGGATAGCCAACCGCGCATGCGCATACCTATACCTAAACCTAGCAATTTAGCACTTAACGGAGCGATATGTCGATGGATTAGAGCCCGCTACAAATCCATATCTGATTTCGCGTTTCGATTCGCGTTTCGATTTCTCAGACAACGACAGTCAGACTTGGCCATATACTATACTAAGCCGCGCAGATCGAACCGAGATCGAACCGACTAGTTTTTCATTA

Full Affymetrix probeset data:

Annotations for 1640090_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720