FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640105_a_at:

>probe:Drosophila_2:1640105_a_at:644:257; Interrogation_Position=2173; Antisense; CACACCGAACATGCTGTCTGAGGAT
>probe:Drosophila_2:1640105_a_at:714:337; Interrogation_Position=2234; Antisense; GCTCTTCTGGAGTCCATCTGCAAGT
>probe:Drosophila_2:1640105_a_at:706:641; Interrogation_Position=2250; Antisense; TCTGCAAGTTTAACCGCGGATCGCT
>probe:Drosophila_2:1640105_a_at:664:219; Interrogation_Position=2280; Antisense; AAGTGCGATCCAACGACTAGCTGCG
>probe:Drosophila_2:1640105_a_at:231:147; Interrogation_Position=2295; Antisense; ACTAGCTGCGGAACTGTGGGACGAA
>probe:Drosophila_2:1640105_a_at:656:97; Interrogation_Position=2443; Antisense; AGATCGAAGACACCGCTGAGCATAG
>probe:Drosophila_2:1640105_a_at:466:365; Interrogation_Position=2467; Antisense; GAATAGTCCCAAAACAATCCAGCAA
>probe:Drosophila_2:1640105_a_at:497:681; Interrogation_Position=2498; Antisense; TATGTATTAACGAAACCCACTGATT
>probe:Drosophila_2:1640105_a_at:261:687; Interrogation_Position=2528; Antisense; TATTGCATCTTATACGTGTCCACCA
>probe:Drosophila_2:1640105_a_at:149:517; Interrogation_Position=2543; Antisense; GTGTCCACCATACATTGCATACGAT
>probe:Drosophila_2:1640105_a_at:357:61; Interrogation_Position=2614; Antisense; ATGTCACTCACTTGCGATCAGATTC
>probe:Drosophila_2:1640105_a_at:648:443; Interrogation_Position=2634; Antisense; GATTCCCGATCGCAACTAAAGCTTT
>probe:Drosophila_2:1640105_a_at:523:173; Interrogation_Position=2651; Antisense; AAAGCTTTACCTATGTGTCCACTAC
>probe:Drosophila_2:1640105_a_at:641:515; Interrogation_Position=2665; Antisense; GTGTCCACTACACGACTGATACTAA

Paste this into a BLAST search page for me
CACACCGAACATGCTGTCTGAGGATGCTCTTCTGGAGTCCATCTGCAAGTTCTGCAAGTTTAACCGCGGATCGCTAAGTGCGATCCAACGACTAGCTGCGACTAGCTGCGGAACTGTGGGACGAAAGATCGAAGACACCGCTGAGCATAGGAATAGTCCCAAAACAATCCAGCAATATGTATTAACGAAACCCACTGATTTATTGCATCTTATACGTGTCCACCAGTGTCCACCATACATTGCATACGATATGTCACTCACTTGCGATCAGATTCGATTCCCGATCGCAACTAAAGCTTTAAAGCTTTACCTATGTGTCCACTACGTGTCCACTACACGACTGATACTAA

Full Affymetrix probeset data:

Annotations for 1640105_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720