FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640111_s_at:

>probe:Drosophila_2:1640111_s_at:723:111; Interrogation_Position=1324; Antisense; AGCAGCAGCTTCACCGTCCAAGTGT
>probe:Drosophila_2:1640111_s_at:465:529; Interrogation_Position=1351; Antisense; GGGATCTAGCTGCATTGTCCAACGC
>probe:Drosophila_2:1640111_s_at:357:251; Interrogation_Position=1382; Antisense; CAAGGACTTTGCTCTGCTGTATCAG
>probe:Drosophila_2:1640111_s_at:30:335; Interrogation_Position=1397; Antisense; GCTGTATCAGCAATTGATCGCTCGA
>probe:Drosophila_2:1640111_s_at:610:449; Interrogation_Position=1412; Antisense; GATCGCTCGAAATCTGCGTCAAGCT
>probe:Drosophila_2:1640111_s_at:556:201; Interrogation_Position=1480; Antisense; AACCTCAGGCTCCTAACAATGCTGC
>probe:Drosophila_2:1640111_s_at:366:335; Interrogation_Position=1506; Antisense; GCTGCTGCAGCCATGATCTACAAGA
>probe:Drosophila_2:1640111_s_at:326:85; Interrogation_Position=1550; Antisense; AGTGCAGCTGCGACAATTGCAACAG
>probe:Drosophila_2:1640111_s_at:429:359; Interrogation_Position=1636; Antisense; GCAACGGTGGTCAGCAAACCGCACA
>probe:Drosophila_2:1640111_s_at:558:73; Interrogation_Position=1669; Antisense; AGGAACATCAAGTTGGAACCCACAA
>probe:Drosophila_2:1640111_s_at:358:459; Interrogation_Position=1719; Antisense; GATTTCCTAATGTCCAATCGATCGG
>probe:Drosophila_2:1640111_s_at:19:237; Interrogation_Position=1734; Antisense; AATCGATCGGAATTAACGCCCATTA
>probe:Drosophila_2:1640111_s_at:720:699; Interrogation_Position=1802; Antisense; TTTTTTCTGTCATTGCCATTTATAC
>probe:Drosophila_2:1640111_s_at:482:29; Interrogation_Position=1874; Antisense; ATAAATTCACTTATCACGCAAGGTG

Paste this into a BLAST search page for me
AGCAGCAGCTTCACCGTCCAAGTGTGGGATCTAGCTGCATTGTCCAACGCCAAGGACTTTGCTCTGCTGTATCAGGCTGTATCAGCAATTGATCGCTCGAGATCGCTCGAAATCTGCGTCAAGCTAACCTCAGGCTCCTAACAATGCTGCGCTGCTGCAGCCATGATCTACAAGAAGTGCAGCTGCGACAATTGCAACAGGCAACGGTGGTCAGCAAACCGCACAAGGAACATCAAGTTGGAACCCACAAGATTTCCTAATGTCCAATCGATCGGAATCGATCGGAATTAACGCCCATTATTTTTTCTGTCATTGCCATTTATACATAAATTCACTTATCACGCAAGGTG

Full Affymetrix probeset data:

Annotations for 1640111_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720