FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640119_a_at:

>probe:Drosophila_2:1640119_a_at:193:563; Interrogation_Position=2064; Antisense; TGGACGGACGTCTCTCCATCGGAGA
>probe:Drosophila_2:1640119_a_at:322:97; Interrogation_Position=2086; Antisense; AGATAAGCTGATTGCAGTGCGCACC
>probe:Drosophila_2:1640119_a_at:131:267; Interrogation_Position=2100; Antisense; CAGTGCGCACCAACGGGAGCGAGAA
>probe:Drosophila_2:1640119_a_at:529:375; Interrogation_Position=2122; Antisense; GAAGAACCTGGAGAACGTAACGCAC
>probe:Drosophila_2:1640119_a_at:19:139; Interrogation_Position=2136; Antisense; ACGTAACGCACGAACTGGCGGTGGC
>probe:Drosophila_2:1640119_a_at:558:573; Interrogation_Position=2152; Antisense; GGCGGTGGCCACGTTGAAATCGATC
>probe:Drosophila_2:1640119_a_at:687:131; Interrogation_Position=2177; Antisense; ACCGACAAGGTGACGCTGATCATTG
>probe:Drosophila_2:1640119_a_at:24:393; Interrogation_Position=2202; Antisense; GAAAGACACAGCATCTGACCACCAG
>probe:Drosophila_2:1640119_a_at:545:77; Interrogation_Position=2242; Antisense; AGGAGGAGGCCTTTCATCCGGACAA
>probe:Drosophila_2:1640119_a_at:640:397; Interrogation_Position=2262; Antisense; GACAACAATTGTCGCAGTCCCAATC
>probe:Drosophila_2:1640119_a_at:335:95; Interrogation_Position=2289; Antisense; AGTTGGCCACCAGCCAGAGCCAAAG
>probe:Drosophila_2:1640119_a_at:515:263; Interrogation_Position=2303; Antisense; CAGAGCCAAAGTCAGGTGCATCAGC
>probe:Drosophila_2:1640119_a_at:421:35; Interrogation_Position=2322; Antisense; ATCAGCAGCAGCATGCGACGCCGAT
>probe:Drosophila_2:1640119_a_at:309:135; Interrogation_Position=2339; Antisense; ACGCCGATGGTCAATTCGCAGTCGA

Paste this into a BLAST search page for me
TGGACGGACGTCTCTCCATCGGAGAAGATAAGCTGATTGCAGTGCGCACCCAGTGCGCACCAACGGGAGCGAGAAGAAGAACCTGGAGAACGTAACGCACACGTAACGCACGAACTGGCGGTGGCGGCGGTGGCCACGTTGAAATCGATCACCGACAAGGTGACGCTGATCATTGGAAAGACACAGCATCTGACCACCAGAGGAGGAGGCCTTTCATCCGGACAAGACAACAATTGTCGCAGTCCCAATCAGTTGGCCACCAGCCAGAGCCAAAGCAGAGCCAAAGTCAGGTGCATCAGCATCAGCAGCAGCATGCGACGCCGATACGCCGATGGTCAATTCGCAGTCGA

Full Affymetrix probeset data:

Annotations for 1640119_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720