FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640121_a_at:

>probe:Drosophila_2:1640121_a_at:108:297; Interrogation_Position=1052; Antisense; CGCATTTTTAGTGAGGATCGCCAGA
>probe:Drosophila_2:1640121_a_at:348:313; Interrogation_Position=1071; Antisense; GCCAGAGTCTGAGCAAGTCTCGAAA
>probe:Drosophila_2:1640121_a_at:139:43; Interrogation_Position=1100; Antisense; ATCGAAACGTTGATGCGGGACCGTA
>probe:Drosophila_2:1640121_a_at:602:219; Interrogation_Position=1142; Antisense; AAGTGCCTCAGCAAGCAGGTTACGG
>probe:Drosophila_2:1640121_a_at:116:385; Interrogation_Position=1166; Antisense; GAACTGCCGACGTTAAATCAGCGCA
>probe:Drosophila_2:1640121_a_at:603:75; Interrogation_Position=1281; Antisense; AGGAGCACGACAGCCCTGAGTACAG
>probe:Drosophila_2:1640121_a_at:487:89; Interrogation_Position=1299; Antisense; AGTACAGGACCCACGAGATCAATAT
>probe:Drosophila_2:1640121_a_at:464:519; Interrogation_Position=1331; Antisense; GTGGACAATGCGGAACTTCCCTCCA
>probe:Drosophila_2:1640121_a_at:108:555; Interrogation_Position=1382; Antisense; GGAGCGCCGCTGAAGGATTTAATCA
>probe:Drosophila_2:1640121_a_at:117:461; Interrogation_Position=1397; Antisense; GATTTAATCAGCTACGACCACGACT
>probe:Drosophila_2:1640121_a_at:588:411; Interrogation_Position=1412; Antisense; GACCACGACTTTCTGGACGTCAATT
>probe:Drosophila_2:1640121_a_at:256:557; Interrogation_Position=1441; Antisense; GGACATGGACTTTTTCTAGGCCCAC
>probe:Drosophila_2:1640121_a_at:147:577; Interrogation_Position=1477; Antisense; GGCCCCTTTTATACTATTCTTGCAT
>probe:Drosophila_2:1640121_a_at:455:529; Interrogation_Position=996; Antisense; GGGTATTCCTGTTCCTAATAAAGCA

Paste this into a BLAST search page for me
CGCATTTTTAGTGAGGATCGCCAGAGCCAGAGTCTGAGCAAGTCTCGAAAATCGAAACGTTGATGCGGGACCGTAAAGTGCCTCAGCAAGCAGGTTACGGGAACTGCCGACGTTAAATCAGCGCAAGGAGCACGACAGCCCTGAGTACAGAGTACAGGACCCACGAGATCAATATGTGGACAATGCGGAACTTCCCTCCAGGAGCGCCGCTGAAGGATTTAATCAGATTTAATCAGCTACGACCACGACTGACCACGACTTTCTGGACGTCAATTGGACATGGACTTTTTCTAGGCCCACGGCCCCTTTTATACTATTCTTGCATGGGTATTCCTGTTCCTAATAAAGCA

Full Affymetrix probeset data:

Annotations for 1640121_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720