FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640128_at:

>probe:Drosophila_2:1640128_at:298:715; Interrogation_Position=311; Antisense; TTCGGCCACTGATCGTCTGGACAAT
>probe:Drosophila_2:1640128_at:7:531; Interrogation_Position=344; Antisense; GGGTTGTGGGACTCTTAACGCTGTC
>probe:Drosophila_2:1640128_at:314:59; Interrogation_Position=388; Antisense; ATGTATGACATTCCCGACTTGGTGC
>probe:Drosophila_2:1640128_at:422:401; Interrogation_Position=403; Antisense; GACTTGGTGCTCTACTTTACCGTAA
>probe:Drosophila_2:1640128_at:729:655; Interrogation_Position=425; Antisense; TAATGGCACTGGTTTTGGGCGGACT
>probe:Drosophila_2:1640128_at:463:331; Interrogation_Position=443; Antisense; GCGGACTGATGTTCTCTGGAGCTAA
>probe:Drosophila_2:1640128_at:565:387; Interrogation_Position=473; Antisense; GAAAATCGTTTCTTCCCAATGGCCT
>probe:Drosophila_2:1640128_at:491:729; Interrogation_Position=512; Antisense; TTGTGACCATTTTCCTGGTAGCTCT
>probe:Drosophila_2:1640128_at:222:477; Interrogation_Position=550; Antisense; GTTTTGTCTGTAGTATCCACGCGAT
>probe:Drosophila_2:1640128_at:410:415; Interrogation_Position=603; Antisense; GAGCGCCCTGGTATTAATAGTCATC
>probe:Drosophila_2:1640128_at:602:443; Interrogation_Position=702; Antisense; GATCTACCTTAACTCATTTACCCTG
>probe:Drosophila_2:1640128_at:384:17; Interrogation_Position=717; Antisense; ATTTACCCTGTTCTTTTGCATATGC
>probe:Drosophila_2:1640128_at:431:347; Interrogation_Position=784; Antisense; GCAGTTGATTTACACGGCCTATCTA
>probe:Drosophila_2:1640128_at:146:287; Interrogation_Position=798; Antisense; CGGCCTATCTACTATTCCAATGTGA

Paste this into a BLAST search page for me
TTCGGCCACTGATCGTCTGGACAATGGGTTGTGGGACTCTTAACGCTGTCATGTATGACATTCCCGACTTGGTGCGACTTGGTGCTCTACTTTACCGTAATAATGGCACTGGTTTTGGGCGGACTGCGGACTGATGTTCTCTGGAGCTAAGAAAATCGTTTCTTCCCAATGGCCTTTGTGACCATTTTCCTGGTAGCTCTGTTTTGTCTGTAGTATCCACGCGATGAGCGCCCTGGTATTAATAGTCATCGATCTACCTTAACTCATTTACCCTGATTTACCCTGTTCTTTTGCATATGCGCAGTTGATTTACACGGCCTATCTACGGCCTATCTACTATTCCAATGTGA

Full Affymetrix probeset data:

Annotations for 1640128_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720