FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640134_a_at:

>probe:Drosophila_2:1640134_a_at:723:109; Interrogation_Position=2642; Antisense; AGAAGGTTGGCCGTCGCGATCGCTT
>probe:Drosophila_2:1640134_a_at:246:449; Interrogation_Position=2659; Antisense; GATCGCTTCCACTTTGGACCGATTA
>probe:Drosophila_2:1640134_a_at:479:425; Interrogation_Position=2674; Antisense; GGACCGATTACAGACTTTAAGGACA
>probe:Drosophila_2:1640134_a_at:396:413; Interrogation_Position=2703; Antisense; GACCTTCAAGCCCAATGTCAAGTTG
>probe:Drosophila_2:1640134_a_at:607:227; Interrogation_Position=2743; Antisense; AATGGCCGCATATTGAACCTCAAAG
>probe:Drosophila_2:1640134_a_at:395:255; Interrogation_Position=2763; Antisense; CAAAGAGGCTTTCCGCTACTTGTCA
>probe:Drosophila_2:1640134_a_at:375:727; Interrogation_Position=2782; Antisense; TTGTCACATAAGTTCCATGGCAAGG
>probe:Drosophila_2:1640134_a_at:299:57; Interrogation_Position=2872; Antisense; ATGAGTTCGACAGACACACCCTTGG
>probe:Drosophila_2:1640134_a_at:167:105; Interrogation_Position=2930; Antisense; AGACGAAGACCGCTTACGTGGTGCT
>probe:Drosophila_2:1640134_a_at:325:343; Interrogation_Position=2941; Antisense; GCTTACGTGGTGCTCAGTGGCAACA
>probe:Drosophila_2:1640134_a_at:471:229; Interrogation_Position=2971; Antisense; AATGTACCAGGTGTCAGTGGCTCCG
>probe:Drosophila_2:1640134_a_at:326:83; Interrogation_Position=3019; Antisense; AGGGCGCAGGAAAGACTAGCAATTT
>probe:Drosophila_2:1640134_a_at:545:239; Interrogation_Position=3072; Antisense; AATAGACACTTCCTAATCCGCGTAC
>probe:Drosophila_2:1640134_a_at:664:159; Interrogation_Position=3118; Antisense; ACAACATATGCATCCGGCTCAAATA

Paste this into a BLAST search page for me
AGAAGGTTGGCCGTCGCGATCGCTTGATCGCTTCCACTTTGGACCGATTAGGACCGATTACAGACTTTAAGGACAGACCTTCAAGCCCAATGTCAAGTTGAATGGCCGCATATTGAACCTCAAAGCAAAGAGGCTTTCCGCTACTTGTCATTGTCACATAAGTTCCATGGCAAGGATGAGTTCGACAGACACACCCTTGGAGACGAAGACCGCTTACGTGGTGCTGCTTACGTGGTGCTCAGTGGCAACAAATGTACCAGGTGTCAGTGGCTCCGAGGGCGCAGGAAAGACTAGCAATTTAATAGACACTTCCTAATCCGCGTACACAACATATGCATCCGGCTCAAATA

Full Affymetrix probeset data:

Annotations for 1640134_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720