FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640169_s_at:

>probe:Drosophila_2:1640169_s_at:539:485; Interrogation_Position=1714; Antisense; GTAGCAGCCCATATAAGTAACATTG
>probe:Drosophila_2:1640169_s_at:249:15; Interrogation_Position=1741; Antisense; ATTAGATCCACAAAGCCGACGACAG
>probe:Drosophila_2:1640169_s_at:300:179; Interrogation_Position=1769; Antisense; AAACATTTGTATCTCCACCACACGA
>probe:Drosophila_2:1640169_s_at:695:47; Interrogation_Position=1845; Antisense; ATGTAAAACTTCAAGGCGGCAGCCG
>probe:Drosophila_2:1640169_s_at:547:331; Interrogation_Position=1860; Antisense; GCGGCAGCCGAGAGATATGTTTCTT
>probe:Drosophila_2:1640169_s_at:591:477; Interrogation_Position=1878; Antisense; GTTTCTTTGGTTGCAGACAGCTCTC
>probe:Drosophila_2:1640169_s_at:667:571; Interrogation_Position=1912; Antisense; GGCTGCCGGCAACTTTTGATAATCA
>probe:Drosophila_2:1640169_s_at:361:103; Interrogation_Position=2020; Antisense; AGAGCGTGCGGAGCGACTTCTGCAT
>probe:Drosophila_2:1640169_s_at:643:353; Interrogation_Position=2051; Antisense; GCACGCTACCCTAGTCTTAATAATT
>probe:Drosophila_2:1640169_s_at:68:473; Interrogation_Position=2087; Antisense; GTTCTAAGCGAACCTGACCGTGTGT
>probe:Drosophila_2:1640169_s_at:397:401; Interrogation_Position=2149; Antisense; GACATGGATATAACCTCTTCCGCTG
>probe:Drosophila_2:1640169_s_at:524:275; Interrogation_Position=2165; Antisense; CTTCCGCTGCTTAGATGTAACCGAT
>probe:Drosophila_2:1640169_s_at:328:129; Interrogation_Position=2217; Antisense; ACCTTTTAGCAAGCAGTCTGTCTGA
>probe:Drosophila_2:1640169_s_at:146:437; Interrogation_Position=2240; Antisense; GAGGAGTCAGCGCAATTATACTTAA

Paste this into a BLAST search page for me
GTAGCAGCCCATATAAGTAACATTGATTAGATCCACAAAGCCGACGACAGAAACATTTGTATCTCCACCACACGAATGTAAAACTTCAAGGCGGCAGCCGGCGGCAGCCGAGAGATATGTTTCTTGTTTCTTTGGTTGCAGACAGCTCTCGGCTGCCGGCAACTTTTGATAATCAAGAGCGTGCGGAGCGACTTCTGCATGCACGCTACCCTAGTCTTAATAATTGTTCTAAGCGAACCTGACCGTGTGTGACATGGATATAACCTCTTCCGCTGCTTCCGCTGCTTAGATGTAACCGATACCTTTTAGCAAGCAGTCTGTCTGAGAGGAGTCAGCGCAATTATACTTAA

Full Affymetrix probeset data:

Annotations for 1640169_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720