FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640220_a_at:

>probe:Drosophila_2:1640220_a_at:381:13; Interrogation_Position=1854; Antisense; ATATCCCAAATGACGCCCCGGTTGG
>probe:Drosophila_2:1640220_a_at:277:1; Interrogation_Position=1948; Antisense; ATTGGCCGTCGGGATCGTGGTTCCT
>probe:Drosophila_2:1640220_a_at:653:515; Interrogation_Position=1979; Antisense; GTGTCCTGGCCAAATCTATAACGTT
>probe:Drosophila_2:1640220_a_at:574:115; Interrogation_Position=2006; Antisense; AGCTTAAAGTGCAACCGCCGGTGTA
>probe:Drosophila_2:1640220_a_at:435:675; Interrogation_Position=2152; Antisense; TATGGAATTCGCTCAGGGCGGCTTG
>probe:Drosophila_2:1640220_a_at:85:573; Interrogation_Position=2168; Antisense; GGCGGCTTGGGCATCGTAAATTGAC
>probe:Drosophila_2:1640220_a_at:476:481; Interrogation_Position=2217; Antisense; GTATGTACGTACACATCGAGCGCCA
>probe:Drosophila_2:1640220_a_at:280:417; Interrogation_Position=2234; Antisense; GAGCGCCACTCAGAATGTCTAGAAA
>probe:Drosophila_2:1640220_a_at:403:153; Interrogation_Position=2282; Antisense; ACATGTACCATTTAAGCAGCTGGCG
>probe:Drosophila_2:1640220_a_at:343:353; Interrogation_Position=2297; Antisense; GCAGCTGGCGAATTCTTGTGAAATA
>probe:Drosophila_2:1640220_a_at:383:511; Interrogation_Position=2323; Antisense; GTGTTATGTTTCCTTACCCTAATCA
>probe:Drosophila_2:1640220_a_at:162:397; Interrogation_Position=2350; Antisense; GACATCCAAGTTTATGGTTGCCCCA
>probe:Drosophila_2:1640220_a_at:18:67; Interrogation_Position=2374; Antisense; ATGGATCGGGCATCCGTAAGCGCCA
>probe:Drosophila_2:1640220_a_at:94:293; Interrogation_Position=2388; Antisense; CGTAAGCGCCACTTGCTACTAAGTG

Paste this into a BLAST search page for me
ATATCCCAAATGACGCCCCGGTTGGATTGGCCGTCGGGATCGTGGTTCCTGTGTCCTGGCCAAATCTATAACGTTAGCTTAAAGTGCAACCGCCGGTGTATATGGAATTCGCTCAGGGCGGCTTGGGCGGCTTGGGCATCGTAAATTGACGTATGTACGTACACATCGAGCGCCAGAGCGCCACTCAGAATGTCTAGAAAACATGTACCATTTAAGCAGCTGGCGGCAGCTGGCGAATTCTTGTGAAATAGTGTTATGTTTCCTTACCCTAATCAGACATCCAAGTTTATGGTTGCCCCAATGGATCGGGCATCCGTAAGCGCCACGTAAGCGCCACTTGCTACTAAGTG

Full Affymetrix probeset data:

Annotations for 1640220_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720