FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640223_a_at:

>probe:Drosophila_2:1640223_a_at:343:715; Interrogation_Position=9466; Antisense; TTCGTGTCCATCACACAGGCAGCTG
>probe:Drosophila_2:1640223_a_at:96:119; Interrogation_Position=9486; Antisense; AGCTGCCGGTGAATATCGCTGCTCT
>probe:Drosophila_2:1640223_a_at:263:621; Interrogation_Position=9505; Antisense; TGCTCTGCCTTCAACCAATATGGAA
>probe:Drosophila_2:1640223_a_at:127:521; Interrogation_Position=9550; Antisense; GTGGCAGTAAAGAAGCCCGCCGACT
>probe:Drosophila_2:1640223_a_at:575:433; Interrogation_Position=9613; Antisense; GAGGGCGAGAACATTCAACTGCAAT
>probe:Drosophila_2:1640223_a_at:351:205; Interrogation_Position=9628; Antisense; CAACTGCAATGCACGGTGACCGATC
>probe:Drosophila_2:1640223_a_at:20:197; Interrogation_Position=9688; Antisense; AACTGGTTCCGCGACGACAGAAGAC
>probe:Drosophila_2:1640223_a_at:221:387; Interrogation_Position=9720; Antisense; GAACAACGCCCGTACGGATAGCCAG
>probe:Drosophila_2:1640223_a_at:9:545; Interrogation_Position=9735; Antisense; GGATAGCCAGATCCTGGTGCTGACC
>probe:Drosophila_2:1640223_a_at:220:621; Interrogation_Position=9752; Antisense; TGCTGACCAATTTGCGACCCGAGGA
>probe:Drosophila_2:1640223_a_at:458:545; Interrogation_Position=9774; Antisense; GGATGCGGGTCGCTACATCTGCAAC
>probe:Drosophila_2:1640223_a_at:567:271; Interrogation_Position=9789; Antisense; CATCTGCAACTCATACGACGTGGAC
>probe:Drosophila_2:1640223_a_at:139:137; Interrogation_Position=9803; Antisense; ACGACGTGGACCGTGGGCAGCAACT
>probe:Drosophila_2:1640223_a_at:60:373; Interrogation_Position=9832; Antisense; GAAGTGTCCATCGACTTGCAAGTAC

Paste this into a BLAST search page for me
TTCGTGTCCATCACACAGGCAGCTGAGCTGCCGGTGAATATCGCTGCTCTTGCTCTGCCTTCAACCAATATGGAAGTGGCAGTAAAGAAGCCCGCCGACTGAGGGCGAGAACATTCAACTGCAATCAACTGCAATGCACGGTGACCGATCAACTGGTTCCGCGACGACAGAAGACGAACAACGCCCGTACGGATAGCCAGGGATAGCCAGATCCTGGTGCTGACCTGCTGACCAATTTGCGACCCGAGGAGGATGCGGGTCGCTACATCTGCAACCATCTGCAACTCATACGACGTGGACACGACGTGGACCGTGGGCAGCAACTGAAGTGTCCATCGACTTGCAAGTAC

Full Affymetrix probeset data:

Annotations for 1640223_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720