FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640265_a_at:

>probe:Drosophila_2:1640265_a_at:685:309; Interrogation_Position=1383; Antisense; CCAATCTTGGAACTGCGACGGGCAT
>probe:Drosophila_2:1640265_a_at:691:623; Interrogation_Position=1396; Antisense; TGCGACGGGCATTCTCATTTTAATC
>probe:Drosophila_2:1640265_a_at:469:697; Interrogation_Position=1414; Antisense; TTTAATCGTAATTGCGCTGCTGTTC
>probe:Drosophila_2:1640265_a_at:462:681; Interrogation_Position=1445; Antisense; TATGGCCTCATGATCTACTACCGAC
>probe:Drosophila_2:1640265_a_at:267:295; Interrogation_Position=1466; Antisense; CGACGTCGCAACTACAAGCTGTATT
>probe:Drosophila_2:1640265_a_at:684:719; Interrogation_Position=1489; Antisense; TTCCTCGTACTCTCAAATGGCTTAG
>probe:Drosophila_2:1640265_a_at:727:703; Interrogation_Position=1510; Antisense; TTAGGAGGCTTACCCATGCCATGCA
>probe:Drosophila_2:1640265_a_at:442:313; Interrogation_Position=1527; Antisense; GCCATGCAGTTGAAGGCCCTACTTA
>probe:Drosophila_2:1640265_a_at:115:41; Interrogation_Position=1553; Antisense; ATCTGAATTAAGAGCCTTGCCCGCT
>probe:Drosophila_2:1640265_a_at:442:303; Interrogation_Position=1573; Antisense; CCGCTCTCTAGTTGCCAAAGTGATT
>probe:Drosophila_2:1640265_a_at:371:457; Interrogation_Position=1594; Antisense; GATTTGCCTTTCTTGGTGTTTTCTA
>probe:Drosophila_2:1640265_a_at:473:497; Interrogation_Position=1633; Antisense; GTCATTGGAGTCTCAGGCGACAGTT
>probe:Drosophila_2:1640265_a_at:213:399; Interrogation_Position=1651; Antisense; GACAGTTGTTGTTATTCGTGGTTAC
>probe:Drosophila_2:1640265_a_at:657:473; Interrogation_Position=1682; Antisense; GTTAAGCCGTGCATTTCACACAAAG

Paste this into a BLAST search page for me
CCAATCTTGGAACTGCGACGGGCATTGCGACGGGCATTCTCATTTTAATCTTTAATCGTAATTGCGCTGCTGTTCTATGGCCTCATGATCTACTACCGACCGACGTCGCAACTACAAGCTGTATTTTCCTCGTACTCTCAAATGGCTTAGTTAGGAGGCTTACCCATGCCATGCAGCCATGCAGTTGAAGGCCCTACTTAATCTGAATTAAGAGCCTTGCCCGCTCCGCTCTCTAGTTGCCAAAGTGATTGATTTGCCTTTCTTGGTGTTTTCTAGTCATTGGAGTCTCAGGCGACAGTTGACAGTTGTTGTTATTCGTGGTTACGTTAAGCCGTGCATTTCACACAAAG

Full Affymetrix probeset data:

Annotations for 1640265_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720