FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640271_s_at:

>probe:Drosophila_2:1640271_s_at:425:331; Interrogation_Position=6009; Antisense; GCGGAAGAGTCAAGGCTGCACACAA
>probe:Drosophila_2:1640271_s_at:184:493; Interrogation_Position=6017; Antisense; GTCAAGGCTGCACACAACAGAATTT
>probe:Drosophila_2:1640271_s_at:396:669; Interrogation_Position=6044; Antisense; TACGAATTGTGCTTTACATGAGCTA
>probe:Drosophila_2:1640271_s_at:444:153; Interrogation_Position=6059; Antisense; ACATGAGCTATACACATACGCTGTG
>probe:Drosophila_2:1640271_s_at:646:385; Interrogation_Position=6093; Antisense; GAACAACTAACTGTTACACTTGAAG
>probe:Drosophila_2:1640271_s_at:167:437; Interrogation_Position=6117; Antisense; GAGGATGAATTTTCGCAAAAGCAGC
>probe:Drosophila_2:1640271_s_at:156:351; Interrogation_Position=6137; Antisense; GCAGCGATTGGCTTTTAAATTAGAG
>probe:Drosophila_2:1640271_s_at:503:421; Interrogation_Position=6159; Antisense; GAGCAAGTTCACAACATAATGTCGT
>probe:Drosophila_2:1640271_s_at:478:495; Interrogation_Position=6182; Antisense; GTCAGAATAAGAGCTGCGCCATCCT
>probe:Drosophila_2:1640271_s_at:312:625; Interrogation_Position=6196; Antisense; TGCGCCATCCTACCAAGATGACAAC
>probe:Drosophila_2:1640271_s_at:143:273; Interrogation_Position=6251; Antisense; CATTTGTATATGTCGTATTTGCTCA
>probe:Drosophila_2:1640271_s_at:409:501; Interrogation_Position=6262; Antisense; GTCGTATTTGCTCATTAATTACTTA
>probe:Drosophila_2:1640271_s_at:587:23; Interrogation_Position=6424; Antisense; ATATCCTTTCTTACCCATATTGAAG
>probe:Drosophila_2:1640271_s_at:40:245; Interrogation_Position=6538; Antisense; AATTTTAAAGCATATGGCCACATTT

Paste this into a BLAST search page for me
GCGGAAGAGTCAAGGCTGCACACAAGTCAAGGCTGCACACAACAGAATTTTACGAATTGTGCTTTACATGAGCTAACATGAGCTATACACATACGCTGTGGAACAACTAACTGTTACACTTGAAGGAGGATGAATTTTCGCAAAAGCAGCGCAGCGATTGGCTTTTAAATTAGAGGAGCAAGTTCACAACATAATGTCGTGTCAGAATAAGAGCTGCGCCATCCTTGCGCCATCCTACCAAGATGACAACCATTTGTATATGTCGTATTTGCTCAGTCGTATTTGCTCATTAATTACTTAATATCCTTTCTTACCCATATTGAAGAATTTTAAAGCATATGGCCACATTT

Full Affymetrix probeset data:

Annotations for 1640271_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720