FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640287_s_at:

>probe:Drosophila_2:1640287_s_at:20:627; Interrogation_Position=1275; Antisense; TGCCGCCATGGGATTGGGCTCCACA
>probe:Drosophila_2:1640287_s_at:187:525; Interrogation_Position=1290; Antisense; GGGCTCCACAGATACTAGTTTCTAC
>probe:Drosophila_2:1640287_s_at:496:677; Interrogation_Position=1305; Antisense; TAGTTTCTACAGTGCCAGCTCATCG
>probe:Drosophila_2:1640287_s_at:132:119; Interrogation_Position=1321; Antisense; AGCTCATCGCTGGAACAGTTTGCCA
>probe:Drosophila_2:1640287_s_at:692:499; Interrogation_Position=1377; Antisense; GTCTGGCAACCACCTGGAGGAGATA
>probe:Drosophila_2:1640287_s_at:117:75; Interrogation_Position=1394; Antisense; AGGAGATACTCATACGGCCCGGCGT
>probe:Drosophila_2:1640287_s_at:285:329; Interrogation_Position=1415; Antisense; GCGTGTTGGAATCGCATTTTCCCGT
>probe:Drosophila_2:1640287_s_at:218:17; Interrogation_Position=1430; Antisense; ATTTTCCCGTTCTTGGCGGTGGCAG
>probe:Drosophila_2:1640287_s_at:425:567; Interrogation_Position=1450; Antisense; GGCAGCGCGATAGAGACACCGGCTT
>probe:Drosophila_2:1640287_s_at:241:339; Interrogation_Position=1500; Antisense; GCTCAGCAATGGCAAACGACCGGAT
>probe:Drosophila_2:1640287_s_at:530:591; Interrogation_Position=1541; Antisense; TGAGGAAACGGCTCTCGTCCGAGGA
>probe:Drosophila_2:1640287_s_at:149:417; Interrogation_Position=1581; Antisense; GAGCGAGGATCTGCCTAGCCTAGTA
>probe:Drosophila_2:1640287_s_at:379:43; Interrogation_Position=1725; Antisense; ATCGCCCACGTCCATTAGTAAATTT
>probe:Drosophila_2:1640287_s_at:255:707; Interrogation_Position=1739; Antisense; TTAGTAAATTTACCCGCACGCGCGT

Paste this into a BLAST search page for me
TGCCGCCATGGGATTGGGCTCCACAGGGCTCCACAGATACTAGTTTCTACTAGTTTCTACAGTGCCAGCTCATCGAGCTCATCGCTGGAACAGTTTGCCAGTCTGGCAACCACCTGGAGGAGATAAGGAGATACTCATACGGCCCGGCGTGCGTGTTGGAATCGCATTTTCCCGTATTTTCCCGTTCTTGGCGGTGGCAGGGCAGCGCGATAGAGACACCGGCTTGCTCAGCAATGGCAAACGACCGGATTGAGGAAACGGCTCTCGTCCGAGGAGAGCGAGGATCTGCCTAGCCTAGTAATCGCCCACGTCCATTAGTAAATTTTTAGTAAATTTACCCGCACGCGCGT

Full Affymetrix probeset data:

Annotations for 1640287_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720