FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640288_s_at:

>probe:Drosophila_2:1640288_s_at:442:525; Interrogation_Position=1215; Antisense; GGGAGAACCTGGATATTCAACGTTA
>probe:Drosophila_2:1640288_s_at:70:211; Interrogation_Position=1247; Antisense; AAGAATCATGCCAACTCGACGTCAA
>probe:Drosophila_2:1640288_s_at:256:91; Interrogation_Position=1276; Antisense; AGTATTACATTTGACGCCCGAGCAG
>probe:Drosophila_2:1640288_s_at:576:465; Interrogation_Position=1354; Antisense; GATTGAGTCTCAGCCGCTGCTGGAA
>probe:Drosophila_2:1640288_s_at:583:319; Interrogation_Position=1366; Antisense; GCCGCTGCTGGAATGGCTGGCAAAC
>probe:Drosophila_2:1640288_s_at:456:193; Interrogation_Position=1391; Antisense; AACTACAAAATGTTCGGCGCCACAC
>probe:Drosophila_2:1640288_s_at:19:323; Interrogation_Position=1407; Antisense; GCGCCACACTGGAGATTATCACGGA
>probe:Drosophila_2:1640288_s_at:491:217; Interrogation_Position=1447; Antisense; AAGTCAGTTCGTGCGAGGTTTCGGT
>probe:Drosophila_2:1640288_s_at:445:1; Interrogation_Position=1464; Antisense; GTTTCGGTGGAATCGGCGGTATCTT
>probe:Drosophila_2:1640288_s_at:369:637; Interrogation_Position=1476; Antisense; TCGGCGGTATCTTACGCTACAAGGT
>probe:Drosophila_2:1640288_s_at:519:543; Interrogation_Position=1501; Antisense; GGATTTCCAGAGTATGCAGCTCGAT
>probe:Drosophila_2:1640288_s_at:605:559; Interrogation_Position=1531; Antisense; GGACAATGATGGCTTCGATCTAGAT
>probe:Drosophila_2:1640288_s_at:300:55; Interrogation_Position=1582; Antisense; ATGAATTTGCCACTACGTTCGACCG
>probe:Drosophila_2:1640288_s_at:475:643; Interrogation_Position=1686; Antisense; TCTTCCATTTTTACGTTGTTGGCGA

Paste this into a BLAST search page for me
GGGAGAACCTGGATATTCAACGTTAAAGAATCATGCCAACTCGACGTCAAAGTATTACATTTGACGCCCGAGCAGGATTGAGTCTCAGCCGCTGCTGGAAGCCGCTGCTGGAATGGCTGGCAAACAACTACAAAATGTTCGGCGCCACACGCGCCACACTGGAGATTATCACGGAAAGTCAGTTCGTGCGAGGTTTCGGTGTTTCGGTGGAATCGGCGGTATCTTTCGGCGGTATCTTACGCTACAAGGTGGATTTCCAGAGTATGCAGCTCGATGGACAATGATGGCTTCGATCTAGATATGAATTTGCCACTACGTTCGACCGTCTTCCATTTTTACGTTGTTGGCGA

Full Affymetrix probeset data:

Annotations for 1640288_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720