FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640296_a_at:

>probe:Drosophila_2:1640296_a_at:48:503; Interrogation_Position=1762; Antisense; GTCGCCGGAGCTGAAGCACAGTGCT
>probe:Drosophila_2:1640296_a_at:68:87; Interrogation_Position=1781; Antisense; AGTGCTCCCGAGATCACATGATATC
>probe:Drosophila_2:1640296_a_at:212:23; Interrogation_Position=1801; Antisense; ATATCAGCGGGTCTGAGGTGTCCAC
>probe:Drosophila_2:1640296_a_at:29:69; Interrogation_Position=1904; Antisense; AGGCCCAGCTATTCAGATTGTTTCA
>probe:Drosophila_2:1640296_a_at:140:91; Interrogation_Position=1941; Antisense; AGTTAGCCCGTAGTTAAGCGCATCC
>probe:Drosophila_2:1640296_a_at:261:301; Interrogation_Position=1964; Antisense; CCCAGCGGCGGAGTTCGAGCAATAT
>probe:Drosophila_2:1640296_a_at:220:421; Interrogation_Position=1980; Antisense; GAGCAATATTCGAACCGGAACTGTT
>probe:Drosophila_2:1640296_a_at:493:285; Interrogation_Position=2000; Antisense; CTGTTTCCTATATCATGGCCCATAA
>probe:Drosophila_2:1640296_a_at:553:321; Interrogation_Position=2017; Antisense; GCCCATAATTACCATACCTTTACCT
>probe:Drosophila_2:1640296_a_at:92:687; Interrogation_Position=2047; Antisense; TATACCTATACCGTTATCCAGCAGC
>probe:Drosophila_2:1640296_a_at:240:113; Interrogation_Position=2066; Antisense; AGCAGCAGCAAATCGCAAGCGTCGC
>probe:Drosophila_2:1640296_a_at:696:635; Interrogation_Position=2087; Antisense; TCGCACACTCACTCTTCAAAGATAG
>probe:Drosophila_2:1640296_a_at:418:651; Interrogation_Position=2102; Antisense; TCAAAGATAGCCATTTAAGCCGGAT
>probe:Drosophila_2:1640296_a_at:554:407; Interrogation_Position=2148; Antisense; GAGCTAATACAGATGGCGGTCCCAG

Paste this into a BLAST search page for me
GTCGCCGGAGCTGAAGCACAGTGCTAGTGCTCCCGAGATCACATGATATCATATCAGCGGGTCTGAGGTGTCCACAGGCCCAGCTATTCAGATTGTTTCAAGTTAGCCCGTAGTTAAGCGCATCCCCCAGCGGCGGAGTTCGAGCAATATGAGCAATATTCGAACCGGAACTGTTCTGTTTCCTATATCATGGCCCATAAGCCCATAATTACCATACCTTTACCTTATACCTATACCGTTATCCAGCAGCAGCAGCAGCAAATCGCAAGCGTCGCTCGCACACTCACTCTTCAAAGATAGTCAAAGATAGCCATTTAAGCCGGATGAGCTAATACAGATGGCGGTCCCAG

Full Affymetrix probeset data:

Annotations for 1640296_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720