FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640301_a_at:

>probe:Drosophila_2:1640301_a_at:567:471; Interrogation_Position=2894; Antisense; GTTCTTCGATCGCATACTGATTATG
>probe:Drosophila_2:1640301_a_at:261:669; Interrogation_Position=2908; Antisense; TACTGATTATGTTCATGCCGGCGAA
>probe:Drosophila_2:1640301_a_at:273:289; Interrogation_Position=2926; Antisense; CGGCGAAGTACCAGCCAGACTATAT
>probe:Drosophila_2:1640301_a_at:600:105; Interrogation_Position=2942; Antisense; AGACTATATGTTCCTGCGCCAGGTT
>probe:Drosophila_2:1640301_a_at:641:243; Interrogation_Position=3017; Antisense; AATTCTCTGGCTGATCAAGTCCTTC
>probe:Drosophila_2:1640301_a_at:489:601; Interrogation_Position=3058; Antisense; TGTTTCCCCTGATGTTGGTGGTGAT
>probe:Drosophila_2:1640301_a_at:339:729; Interrogation_Position=3085; Antisense; TTGGCATCAGAAAGGCCCTGGATCT
>probe:Drosophila_2:1640301_a_at:438:589; Interrogation_Position=3103; Antisense; TGGATCTGGTGTTCACTCGGCGCGA
>probe:Drosophila_2:1640301_a_at:355:641; Interrogation_Position=3119; Antisense; TCGGCGCGAGCTGAAGATCCTGGAC
>probe:Drosophila_2:1640301_a_at:34:333; Interrogation_Position=3171; Antisense; GCGGCGGCGGATGATCTGCATAAAC
>probe:Drosophila_2:1640301_a_at:456:627; Interrogation_Position=3191; Antisense; TAAACTGGACGCTGAGGTGGGCTTA
>probe:Drosophila_2:1640301_a_at:244:531; Interrogation_Position=3206; Antisense; GGTGGGCTTATTGGCGCGCATTTTC
>probe:Drosophila_2:1640301_a_at:434:125; Interrogation_Position=3268; Antisense; AGCCGCCGGGCCTTGATGATGGAAT
>probe:Drosophila_2:1640301_a_at:9:467; Interrogation_Position=3312; Antisense; GTTGGCGCTGGACTCATCACTTGCA

Paste this into a BLAST search page for me
GTTCTTCGATCGCATACTGATTATGTACTGATTATGTTCATGCCGGCGAACGGCGAAGTACCAGCCAGACTATATAGACTATATGTTCCTGCGCCAGGTTAATTCTCTGGCTGATCAAGTCCTTCTGTTTCCCCTGATGTTGGTGGTGATTTGGCATCAGAAAGGCCCTGGATCTTGGATCTGGTGTTCACTCGGCGCGATCGGCGCGAGCTGAAGATCCTGGACGCGGCGGCGGATGATCTGCATAAACTAAACTGGACGCTGAGGTGGGCTTAGGTGGGCTTATTGGCGCGCATTTTCAGCCGCCGGGCCTTGATGATGGAATGTTGGCGCTGGACTCATCACTTGCA

Full Affymetrix probeset data:

Annotations for 1640301_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720